Rv2245 - c.654C>G
Drug resistance types
44 Sensitive
4 RR-TB
78 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 25 |
| 66 | |
| lineage3 | 5 |
| lineage4.1.2.1 | 12 |
| lineage4.9 | 45 |
| lineage4.2.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.6.2.2 | 2 |
| lineage1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.4.1;La1.7 | 1 |
| La1 | 1 |
| La1.8.1 | 2 |
| lineage6.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 207 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2517475 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR278594 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6325442 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831638 | Sensitive | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323055 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283010 | Other | La1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4188350 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR736839 | Other | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR736865 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR990545 | Other | lineage3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR16370251 | Sensitive | None | SRR13861646 | Other | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR19451491 | Sensitive | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176643 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675279 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2513283 | Other | lineage5.1.4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820268 | Sensitive | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2446382 | Other | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl |
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