Rv0006 - c.-433T>C
Drug resistance types
114 Sensitive
3 RR-TB
96 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 58 |
| La1.7.1 | 1 |
| lineage2.2.1 | 10 |
| lineage2.2 | 5 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1 | 1 |
| 86 | |
| lineage4.1.1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4 | 106 |
| lineage1.1.2 | 1 |
| lineage2.1 | 1 |
| lineage3 | 2 |
| lineage5.1.4 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4;lineage3.1 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 293 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR22424787 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR2101409 | Sensitive | lineage4.3.4.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675234 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR181887 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675522 | Other | None | SRR3675574 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | ERR11049657 | Sensitive | lineage1.1.2 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4816466 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2514125 | Other | lineage3 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341467 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341330 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693257 | Other | None | ERR4821057 | HR-TB | lineage4 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6511621 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3445501 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4798262 | HR-TB | La1 | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4798431 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR14782405 | HR-TB | None |
|---|
