Rv0006 - c.-433T>C


Drug resistance types
27 Sensitive 10 RR-TB 77 HR-TB 15 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage4.9 88
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 2
lineage2.2.1 5
lineage4.9;lineage7 3
lineage4 6
La1.7;lineage4.9 6
lineage4.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.3.4.2.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2 2
lineage4.4.1.1 1
lineage1.2.1.2 1
lineage4.6.2.2 2
lineage1.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage9 1
lineage4.3.4.1 1
lineage4.4.1.2 1
lineage4.1.1.3;lineage4.9 2
lineage5.1.4 1
2
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
lineage2.2.1;lineage4 1
lineage2.2.1.1 1
La1.7;lineage4.9;lineage7 3
lineage1;lineage4.9 1
La3;lineage4.3.4 1
lineage4.9;lineage6.3 1
La3;lineage4.9 1
lineage4.1.2.1 1
M.canetti;lineage4.9 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La1.7.1 1
lineage4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.8 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 187
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811030 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046382 RR-TB lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR12416840 MDR-TB lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR2446382 Other lineage4 None
ERR3283018 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341299 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3275450 Other lineage4 None
ERR369151 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5341384 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR11049657 Sensitive lineage1.1.2 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675488 Other La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
SRR3675387 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4769444 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR473323 HR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR1063896 HR-TB None
SRR12708416 Sensitive None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341330 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798099 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4816466 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR387051 RR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR14782054 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3283032 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR3797043 Sensitive lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR736831 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR363456 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR373945 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866639 HR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811031 Other lineage4.5 None
ERR400336 Sensitive lineage4.9 None