Rv0006 - c.-433T>C
Drug resistance types
27 Sensitive
10 RR-TB
77 HR-TB
15 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 88 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage7 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4 | 6 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 1 |
| lineage2.2.1 | 5 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 2 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage2.2 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797474 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR3675522 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4811030 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR11049657 | Sensitive | lineage1.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2446382 | Other | lineage4 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12708416 | Sensitive | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR736831 | Other | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3801503 | Other | lineage4.6.2.2 | None | ERR473332 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None |
|---|
