lineage | Count |
---|---|
lineage4.9 | 24 |
33 | |
lineage4 | 46 |
lineage4.1.2.1 | 2 |
La1.8.1 | 1 |
lineage2 | 2 |
lineage2.2.1 | 1 |
La1 | 1 |
lineage4.5 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3.1 | 1 |
lineage2.2.1.1 | 3 |
lineage4.3.3 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage2.2.2 | 1 |
lineage4.1 | 1 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 2 |
spoligotype | Count |
---|---|
None | 126 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046611 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | SRR6046897 | Sensitive | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | SRR8600206 | Other | La1.8.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | ERR4811030 | Sensitive | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR6336766 | Other | lineage1.2.1.2.1 | None | ERR736874 | HR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172951 | Other | None | ERR4811105 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1175508 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR15368784 | Sensitive | lineage2.2.1.1 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR15368747 | Sensitive | lineage2.2.1.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR16157123 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR8025574 | Pre-XDR-TB | lineage2.2.2 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR6280331 | Sensitive | lineage2.2.1.1 | cn | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR4817735 | Other | lineage4.8 | None | SRR3742665 | HR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341302 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044790 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None |
---|