Rv0006 - c.480G>C
Drug resistance types
30 Sensitive
1 RR-TB
8 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.9 | 35 |
| lineage2.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 5 |
| lineage2.2.1;lineage6.3 | 1 |
| 3 | |
| lineage4 | 3 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.2 | 1 |
| La3;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR176793 | Other | lineage4.1.1.1 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| SRR28119777 | Other | lineage4.9 | None |
| SRR3675229 | Sensitive | lineage4.9 | None |
| ERR4797054 | Pre-XDR-TB | lineage2.1 | None |
| SRR1184294 | Other | lineage4.9 | None |
| SRR28119805 | Other | lineage4.9 | None |
| SRR12142341 | HR-TB | lineage2.1 | None |
| ERR13285192 | Sensitive | lineage4.9 | None |
| SRR6045503 | Sensitive | lineage4.9 | None |
| ERR13265528 | Other | lineage4.9;lineage6.3 | None |
| ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1184388 | Other | lineage2.1;lineage4.9 | None |
| SRR6044790 | Other | lineage2.1;lineage4.9 | None |
| ERR363490 | Sensitive | lineage4.9 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR29096897 | Sensitive | lineage4.9 | None |
| SRR1173384 | Other | lineage4.9 | None |
| SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
| SRR6789626 | Other | None | |
| ERR4178226 | Sensitive | lineage4 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| ERR349298 | Sensitive | lineage4.9 | None |
| SRR1165699 | Other | lineage4.9 | None |
| SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR349266 | Sensitive | lineage4.9 | None |
| ERR373946 | Sensitive | lineage4.9 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1173778 | Other | lineage4.9 | None |
| ERR369162 | Other | lineage4.9 | None |
| ERR4811030 | Sensitive | lineage4.9 | None |
| SRR6046611 | Sensitive | lineage4.9 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| SRR1173629 | Other | lineage2.1;lineage4.9 | None |
| ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4799547 | HR-TB | lineage2.2.1 | None |
| SRR3675279 | Sensitive | lineage4.9 | None |
| SRR6280331 | Sensitive | lineage2.2.1.1 | cn |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR373945 | Sensitive | lineage4.9 | None |
| ERR6865502 | Sensitive | lineage4 | None |
| ERR363449 | Sensitive | lineage4.9 | None |
| SRR28119753 | Other | lineage4.9 | None |
| SRR29096900 | Sensitive | lineage4.3.4.2 | None |
| SRR29017461 | Other | La3;lineage4.9 | None |
| ERR363499 | Sensitive | lineage4.9 | None |
| ERR13285191 | Sensitive | lineage4.9 | None |
| ERR4812155 | Other | lineage4.9 | None |
| ERR363502 | Other | lineage4.9 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
| SRR1184381 | MDR-TB | None | |
| ERR349264 | Sensitive | lineage4.9 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| SRR28119756 | Other | lineage4.9;lineage6.3 | None |
| ERR363446 | Sensitive | lineage4.9 | None |
| SRR1165667 | Other | lineage4.9;lineage6.3 | None |
| ERR4407463 | HR-TB | None | |
| SRR26399239 | Sensitive | lineage4.9 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR4817735 | Other | lineage4.8 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR26399973 | Other | La3;lineage4.9 | None |
| SRR15368784 | Sensitive | lineage2.2.1.1 | None |
| SRR3675216 | Other | lineage2.1;lineage4.9 | None |
| ERR2027263 | Other | lineage4 | None |
| ERR363437 | Sensitive | lineage4.9 | None |
| SRR15368747 | Sensitive | lineage2.2.1.1 | None |
| ERR400345 | Other | lineage4.9 | None |
| SRR11662694 | Other | lineage4.9 | None |
| ERR363474 | Sensitive | lineage4.9 | None |
| ERR349299 | Other | lineage4.9 | None |
| ERR400326 | Other | lineage4.9 | None |
