Rv0701 - c.48A>G
Drug resistance types
56 Sensitive
2 RR-TB
84 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 2 |
| 86 | |
| lineage4 | 47 |
| lineage4.9 | 29 |
| lineage4.3 | 1 |
| lineage3 | 3 |
| lineage2.2.1 | 5 |
| lineage4.6.2.2 | 2 |
| lineage2.2 | 7 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| La3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675279 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR176643 | HR-TB | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4817377 | Sensitive | lineage3 | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212033 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4819051 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6045399 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046397 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6511621 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035122 | Sensitive | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR349330 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3283028 | Other | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR400336 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR6358979 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786843 | Other | None | SRR1175507 | MDR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1174897 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR1175508 | Other | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR21677854 | Other | lineage4.1.1.3 | None | ERR8025648 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR176778 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None |
|---|
