Rv3596c - c.684A>T
Drug resistance types
61 Sensitive
11 RR-TB
12 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 67 |
| La1.6;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3 | 7 |
| lineage4.5 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 3 |
| lineage4.3 | 1 |
| lineage3.1.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| 1 | |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4 | 1 |
| lineage3;lineage4 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675477 | Sensitive | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675522 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1049672 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675318 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR13266892 | MDR-TB | lineage3.1.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1062918 | Other | lineage3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None |
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