Rv3596c - c.684A>T
Drug resistance types
51 Sensitive
14 RR-TB
14 HR-TB
11 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 49 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 8 |
| lineage5.1.4 | 1 |
| lineage4 | 29 |
| 21 | |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.1 | 9 |
| lineage4.1 | 2 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage1.1.3.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 138 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818710 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | ERR2517475 | Other | lineage4 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034652 | Other | None | ERR1063883 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR10796569 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797474 | Other | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR6359069 | Other | lineage4.9 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1173740 | Other | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1175508 | Other | lineage4.9 | None | SRR13837442 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675387 | Sensitive | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675542 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR2229389 | RR-TB | lineage4 | None |
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