Rv2764c - c.438T>C
Drug resistance types
117 Sensitive
23 RR-TB
52 HR-TB
25 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.1 | 137 |
| lineage2.1 | 1 |
| lineage3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9 | 65 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.3.3 | 1 |
| 7 | |
| lineage1.2.2.1;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8 | 2 |
| lineage1.2.2.1;lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4 | 2 |
| La1.7;lineage4.9 | 2 |
| La3;lineage4.9 | 7 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| M.canetti;lineage4.9 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage7 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 299 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6855955 | Sensitive | lineage1.2.2.1 | None | ERR11466570 | Sensitive | lineage1.2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR2515986 | Sensitive | lineage1.2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR2199969 | Sensitive | lineage1.2.2.1 | sz | SRR6982333 | Sensitive | lineage1.2.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR2101591 | Sensitive | lineage1.2.2.1 | None | ERR6929521 | Sensitive | lineage1.2.2.1 | None | ERR2660519 | Sensitive | lineage1.2.2.1 | None | SRR22251187 | Sensitive | lineage4.3.3 | None | ERR11252480 | Sensitive | lineage1.2.2.1 | None | ERR11252489 | Sensitive | lineage1.2.2.1 | None | SRR6789626 | Other | None | ERR11252614 | Sensitive | lineage1.2.2.1 | None | ERR11252520 | Sensitive | lineage1.2.2.1 | None | ERR11252517 | Sensitive | lineage1.2.2.1 | None | SRR18213713 | HR-TB | None | ERR11252613 | Sensitive | lineage1.2.2.1 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR212100 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4831530 | MDR-TB | lineage1.2.2.1 | None | ERR11465568 | Sensitive | lineage1.2.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR7821216 | Sensitive | lineage1.2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1181314 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | ERR7821086 | Sensitive | lineage1.2.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9786569 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR9120067 | MDR-TB | lineage1.2.2.1 | None | ERR10748357 | MDR-TB | lineage1.2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR1183065 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | ERR2515975 | Sensitive | lineage1.2.2.1 | None | ERR8479580 | Other | lineage1.2.2.1;lineage4.1.1.1 | None | ERR4830551 | RR-TB | lineage1.2.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4809116 | Sensitive | lineage1.2.2.1 | za | ERR9786627 | Other | lineage4.1.2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR11488727 | MDR-TB | lineage1.2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR12882576 | Sensitive | lineage1.2.2.1 | None | ERR926160 | Other | lineage4.9 | None | SRR12882245 | Sensitive | lineage1.2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR2660415 | Sensitive | lineage1.2.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11591454 | Sensitive | lineage1.2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR11466052 | Sensitive | lineage1.2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR7821227 | Sensitive | lineage1.2.2.1 | None | ERR2199946 | Sensitive | lineage1.2.2.1 | sz | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR7821135 | Sensitive | lineage1.2.2.1 | None | ERR4809288 | Sensitive | lineage1.2.2.1 | za | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR2199956 | Other | lineage1.2.2.1 | sz | ERR2199774 | Sensitive | lineage1.2.2.1 | None | ERR7821199 | Sensitive | lineage1.2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR11465589 | Sensitive | lineage1.2.2.1 | None | ERR7737850 | MDR-TB | lineage1.2.2.1 | None | ERR10610189 | MDR-TB | lineage1.2.2.1 | None | SRR1180271 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | ERR4423736 | RR-TB | lineage1.2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2199945 | Sensitive | lineage1.2.2.1 | sz | SRR12882248 | Sensitive | lineage1.2.2.1 | None | ERR11252475 | Sensitive | lineage1.2.2.1 | None | ERR4796577 | HR-TB | None | ERR11252709 | Sensitive | lineage1.2.2.1 | None | ERR9787197 | Other | None | ERR11252427 | Sensitive | lineage1.2.2.1 | None | ERR11252471 | HR-TB | lineage1.2.2.1 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR2660491 | Sensitive | lineage1.2.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | ERR7821207 | Sensitive | lineage1.2.2.1 | None | ERR7821104 | Sensitive | lineage1.2.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR11641193 | Sensitive | lineage1.2.2.1 | None | SRR9971118 | RR-TB | lineage1.2.2.1 | None | ERR9806919 | RR-TB | lineage1.2.2.1 | None | ERR2199942 | Sensitive | lineage1.2.2.1 | sz | SRR1181127 | Sensitive | lineage1.2.2.1;lineage4.1.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR8975476 | Sensitive | lineage1.2.2.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6855904 | Sensitive | lineage1.2.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11466426 | Sensitive | lineage1.2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2199955 | HR-TB | lineage1.2.2.1 | sz | SRR6044942 | HR-TB | lineage4.9 | None | ERR7821164 | Other | lineage1.2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR11466460 | Sensitive | lineage1.2.2.1 | None | ERR2515557 | Sensitive | lineage1.2.2.1 | za | ERR926154 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR221606 | Sensitive | lineage1.2.2.1 | mw | ERR11488713 | MDR-TB | lineage1.2.2.1 | None | ERR11465512 | MDR-TB | lineage1.2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR2660489 | Sensitive | lineage1.2.2.1 | None | ERR7902617 | Sensitive | lineage1.2.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR181778 | Sensitive | lineage1.2.2.1 | mw | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4809143 | Sensitive | lineage1.2.2.1 | za | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811031 | Other | lineage4.5 | None | ERR7821198 | Sensitive | lineage1.2.2.1 | None | ERR221557 | Sensitive | lineage1.2.2.1 | mw | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10315632 | Sensitive | lineage1.2.2.1 | None | ERR3797085 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR2660456 | Sensitive | lineage1.2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR12882569 | Sensitive | lineage1.2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR11466569 | Sensitive | lineage1.2.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR11465613 | Sensitive | lineage1.2.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR2660488 | Sensitive | lineage1.2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12882607 | MDR-TB | lineage1.2.2.1 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR1633852 | Sensitive | lineage1.2.2.1 | za | ERR473332 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR11466391 | Sensitive | lineage1.2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR9807022 | MDR-TB | lineage1.2.2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR6929532 | MDR-TB | lineage1.2.2.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR26331612 | RR-TB | lineage1.2.2.1 | None | ERR9807021 | Sensitive | lineage1.2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR926155 | Other | lineage4.9 | None | ERR11465746 | Sensitive | lineage1.2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR9120066 | MDR-TB | lineage1.2.2.1 | None | ERR971389 | Other | lineage4.9 | None | SRR6855862 | Sensitive | lineage1.2.2.1 | None | SRR3675572 | Other | None | ERR11252693 | Sensitive | lineage1.2.2.1 | None | ERR11252686 | Sensitive | lineage1.2.2.1 | None | ERR11252491 | Sensitive | lineage1.2.2.1 | None | ERR9117709 | Other | None | ERR12745257 | MDR-TB | lineage1.2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR11252590 | Sensitive | lineage1.2.2.1 | None | SRR3675236 | Other | None | ERR279546 | Sensitive | lineage1.2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2516075 | Sensitive | lineage1.2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR2199775 | Sensitive | lineage1.2.2.1 | None | ERR2199995 | Sensitive | lineage1.2.2.1 | sz | ERR4423516 | RR-TB | lineage1.2.2.1 | None | ERR7821171 | Other | lineage1.2.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR11465247 | Sensitive | lineage1.2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR2660533 | Sensitive | lineage1.2.2.1 | None | SRR12882571 | Sensitive | lineage1.2.2.1 | None | ERR11466018 | Sensitive | lineage1.2.2.1 | None | ERR11466485 | Sensitive | lineage1.2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4830550 | RR-TB | lineage1.2.2.1 | None | ERR2660529 | Other | lineage1.2.2.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR12882572 | Sensitive | lineage1.2.2.1 | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR4831556 | RR-TB | lineage1.2.2.1 | None | ERR7902620 | Sensitive | lineage1.2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR8699788 | Sensitive | lineage1.2.2.1 | None | ERR4423515 | RR-TB | lineage1.2.2.1 | None | ERR926157 | Other | lineage4.9 | None | SRR5535929 | Sensitive | lineage1.2.2.1 | None | ERR8975947 | RR-TB | lineage1.2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR12882490 | Sensitive | lineage1.2.2.1 | None | SRR9971083 | RR-TB | lineage1.2.2.1 | None | ERR2199949 | Sensitive | lineage1.2.2.1 | sz | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | ERR11465681 | Sensitive | lineage1.2.2.1 | None | ERR2660470 | Sensitive | lineage1.2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR10610295 | MDR-TB | lineage1.2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR2101572 | RR-TB | lineage1.2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2199923 | Sensitive | lineage1.2.2.1 | sz | ERR4811030 | Other | lineage4.9 | None | ERR11466074 | RR-TB | lineage1.2.2.1 | None | ERR4831564 | MDR-TB | lineage1.2.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR7821195 | Sensitive | lineage1.2.2.1 | None | ERR9806852 | MDR-TB | lineage1.2.2.1 | None | ERR11488710 | RR-TB | lineage1.2.2.1 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR495077 | Sensitive | lineage1.2.2.1 | None | ERR212097 | Sensitive | lineage1.2.2.1 | mw | ERR4819877 | HR-TB | lineage4.9 | None | ERR9806837 | MDR-TB | lineage1.2.2.1 | None | ERR11466186 | Sensitive | lineage1.2.2.1 | None | ERR11488742 | MDR-TB | lineage1.2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR9971082 | RR-TB | lineage1.2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR2660548 | Sensitive | lineage1.2.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR7821200 | Sensitive | lineage1.2.2.1 | None |
|---|
