EBG00000313339 - n.1823A>T
Drug resistance types
140 Sensitive
5 RR-TB
50 HR-TB
10 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 73 |
| lineage4.1.1.3 | 3 |
| lineage4.9 | 108 |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage4.6.1.1 | 2 |
| 29 | |
| La1.8.1 | 5 |
| lineage3 | 7 |
| lineage5.1.2 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 7 |
| lineage2.2.1 | 16 |
| lineage4.5 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 292 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796569 | Other | lineage4.9 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR108471 | HR-TB | lineage4 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283014 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR4798431 | HR-TB | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800197 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR7801125 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13837417 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR23174457 | Other | La1.8.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692868 | Sensitive | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692771 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692846 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | SRR8692831 | Other | lineage4.9 | None | SRR8692888 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692853 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR8692899 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675488 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675222 | Other | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816656 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR228180 | Sensitive | lineage3 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR2100532 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341396 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR4831638 | Sensitive | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None |
|---|
