Rv0667 - c.762_763insGC
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
49 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 46 |
| La3;lineage4.9 | 7 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.1 | 1 |
| lineage2.2.1 | 10 |
| lineage4 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
| 2 | |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| La1.7;lineage4.9 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage4 | 1 |
| lineage4.3.3 | 1 |
| La1.7 | 1 |
| lineage3 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR400326 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR7535086 | Other | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR12708416 | Sensitive | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR5341373 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None |
|---|
