Rv0668 - c.2179_2181delAGCinsTCG
Drug resistance types
63 Sensitive
2 RR-TB
46 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 112 |
| lineage4.9;lineage7 | 2 |
| La1.8.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4 | 2 |
| lineage4 | 3 |
| lineage2.2.1 | 8 |
| lineage4.4.1.2 | 1 |
| lineage3 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.8 | 2 |
| La2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1;lineage4.9 | 2 |
| lineage1.1.1 | 1 |
| 1 | |
| La2;lineage2.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 167 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341299 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR7236177 | Other | La1.8.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675270 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR369158 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045347 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR11662694 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR29096107 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR473332 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR4798823 | HR-TB | None | ERR502511 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None |
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