Rv3596c - c.1968C>T
Drug resistance types
85 Sensitive
1 RR-TB
7 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage4 | 49 |
| 11 | |
| lineage4.1.2.1 | 5 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 4 |
| lineage4.5 | 1 |
| lineage1.1.1 | 13 |
| lineage4.1 | 1 |
| lineage4.8 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6046897 | Sensitive | lineage4 | None | ERR495202 | Sensitive | lineage2.2.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR11044925 | Sensitive | lineage4.1.2.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797313 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR718334 | Sensitive | lineage1.1.1 | th | ERR718237 | Sensitive | lineage1.1.1 | th | ERR718227 | Sensitive | lineage1.1.1 | th | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR718491 | Sensitive | lineage1.1.1 | th | ERR718512 | Sensitive | lineage1.1.1 | th | ERR718553 | Sensitive | lineage1.1.1 | th | ERR752138 | Sensitive | lineage1.1.1 | th | ERR775801 | Sensitive | lineage1.1.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | ERR752103 | Sensitive | lineage1.1.1 | th | ERR767965 | Sensitive | lineage1.1.1 | th | ERR768008 | Sensitive | lineage1.1.1 | th | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR20969611 | Sensitive | lineage1.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20969694 | Sensitive | lineage1.1.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815296 | Sensitive | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675387 | Sensitive | None | SRR3675542 | Other | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR3275813 | Sensitive | lineage4.8 | nl | ERR2513283 | Other | lineage5.1.4 | None |
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