Rv0006 - c.-683T>C
Drug resistance types
16 Sensitive
2 RR-TB
21 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| La3;lineage4.9 | 7 |
| lineage1.1.3.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.5 | 1 |
| La2;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| La3;lineage4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675541 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR6866807 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675387 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3283028 | Other | La3;lineage4 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None |
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