Rv0006 - c.-683T>C

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
18 Sensitive 2 RR-TB 20 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 17 Other
lineage Counts
lineage Count
lineage4.9 31
lineage3 1
La3;lineage4.9 7
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
1
La1;lineage4.9 1
lineage1.1.3.1 1
La1.7;M.canetti;lineage4.9 1
La1.6;lineage4 1
lineage4.3.4 1
lineage2.2.1;lineage4 1
lineage2.2.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4 1
M.canetti;lineage4.9 2
La1.7;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.5 1
La3;lineage4 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage2.2 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 63
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283018 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR4819422 HR-TB lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675279 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR6358991 HR-TB None
ERR3283011 Other La3;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR11662690 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675522 Other lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR3283028 Other La3;lineage4 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
SRR10809074 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR9970978 Sensitive lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None