EBG00000313339 - n.289A>T


Drug resistance types
131 Sensitive 4 RR-TB 102 HR-TB 22 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 110 Other
lineage Counts
lineage Count
lineage4 101
lineage4.9 48
111
lineage2.2.1 19
lineage4.1.1 4
lineage4.1.2.1 12
lineage4.3.2.1 3
lineage4.2.1 3
lineage4.8 7
lineage4.3.4.2.1 3
lineage4.3.3 6
lineage4.1 4
lineage1.1.2 1
La2 1
lineage4.1.2 2
lineage3.1.2 2
lineage4.1.1.3 3
lineage4.3.4.1 1
lineage3;La3 1
lineage4.6.1.1 3
La1.2 1
lineage1.2.2.2 1
lineage3 5
lineage2.2 4
lineage2.2.1.2 1
lineage4.5 2
lineage3.1.2.1 1
lineage4.8;La3 2
lineage1.1.3.1 1
lineage1.1.3.2 1
lineage4.6.2.2 1
lineage6 1
lineage6.1.3 2
lineage6.3.1 1
lineage2.2.1.1 2
La1.8.1 2
lineage3.1 2
lineage2 2
lineage2.1 3
lineage7;lineage2.2.1.2 1
lineage3.1.3 1
lineage1.1.1 2
lineage4.1.1.1 1
lineage4.9;lineage4.6.3 1
lineage4.2;La1.7 1
lineage6.3;lineage2.2.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.4.1.1 1
lineage4;lineage2 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 382
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341455 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341302 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
SRR5341323 Sensitive lineage4 None
SRR5341330 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR4830353 Other None
SRR5341461 Sensitive lineage4 None
SRR5341469 Other lineage4 None
SRR6045480 Other lineage4.1.1 None
ERR2652925 HR-TB lineage4.9 None
SRR6045526 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045706 Sensitive lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045053 Other None
SRR6045158 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046225 HR-TB None
SRR5341467 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
ERR2517475 Other lineage4 None
SRR5341470 HR-TB None
SRR6045503 HR-TB None
SRR5535933 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6046046 Other None
SRR6046245 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6046397 Other None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046492 Other None
ERR502510 Sensitive lineage4 None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
ERR4831117 HR-TB None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6785315 Sensitive lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6046540 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 HR-TB None
ERR4831638 Sensitive None
SRR6832644 Other lineage4.3.3 None
ERR502532 HR-TB None
ERR502524 HR-TB La2 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR502943 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
SRR9970978 Sensitive lineage4.1.2 None
SRR7585419 MDR-TB lineage3.1.2 None
ERR323107 Other lineage4 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR323043 HR-TB None
ERR323039 HR-TB None
ERR11465025 Other lineage4.1.1.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR323053 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023302 MDR-TB lineage3;La3 None
ERR11465024 Other lineage4.1.1.3 None
ERR1063855 Other lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR1035122 Sensitive None
ERR1035157 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR323115 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283057 HR-TB lineage4 None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR369151 Sensitive lineage4.9 None
ERR3445504 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797046 HR-TB None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797048 HR-TB None
ERR400326 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797064 Sensitive None
ERR3797081 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4024991 Other None
ERR400345 Other lineage4 None
ERR4188247 HR-TB None
ERR4769452 HR-TB None
ERR4407463 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4796584 Sensitive lineage1.2.2.2 None
ERR4796254 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4798823 HR-TB lineage4 None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR6358755 Other lineage4.6.1.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR4812155 Sensitive None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR12015083 Other lineage4.8;La3 None
ERR4811105 HR-TB None
ERR6197030 Other lineage4.9 None
ERR6866410 Sensitive None
ERR6865502 Sensitive lineage4 None
ERR6358979 Other None
ERR6358991 HR-TB None
ERR6866022 Other None
ERR702406 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR736865 HR-TB None
ERR736874 HR-TB None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR7821123 Other lineage1.1.3.2 None
ERR9786639 Sensitive lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
ERR970413 MDR-TB lineage2.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
ERR9787256 Other lineage6.1.3 None
ERR987722 HR-TB None
ERR987765 Sensitive lineage4.6.1.1 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR11462861 Other La1.8.1 None
SRR1172234 Other None
SRR1169194 Other None
SRR1172310 HR-TB None
SRR1172951 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173400 Other None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173633 HR-TB lineage4.9 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173629 Other None
SRR1173777 Other lineage4 None
SRR1173778 Other None
SRR1175049 RR-TB None
SRR1174897 HR-TB None
SRR1173788 Other None
SRR1175507 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1175500 MDR-TB lineage4 None
SRR1183965 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR12142341 HR-TB None
SRR13837584 Sensitive lineage4.9 None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR14801749 Sensitive None
SRR13837915 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR18003019 Other lineage2.2.1 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1710057 Other lineage2.1 None
SRR17832802 HR-TB lineage3 None
SRR15368973 Other None
SRR16157123 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18910194 HR-TB lineage2.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19304036 HR-TB None
SRR20632814 Sensitive lineage4 None
SRR20969677 HR-TB lineage2 None
SRR20970016 Other lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
ERR11081257 Other lineage4.8 None
SRR22424787 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR11081258 Other lineage4.8 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR21732980 Other lineage4.3.3 None
SRR23961559 Other lineage4.2;La1.7 None
ERR176793 Other lineage4.1.1 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3416776 Other lineage2.1 None
SRR3675488 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675222 Other None
SRR3675229 Other lineage4 None
ERR702405 Sensitive lineage2.1 None
SRR3675279 Other None
SRR3675266 Sensitive lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675283 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
ERR176740 HR-TB None
ERR176751 HR-TB None
SRR3675555 HR-TB None
SRR3675522 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
ERR4816470 Other lineage3 None
ERR212121 HR-TB None
SRR5341384 Sensitive lineage4.9 None
SRR3742665 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816762 Other lineage4;lineage2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR4817915 RR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR2446566 Other lineage4.1 None
ERR4818831 Other lineage3 None
ERR2513470 Other lineage4.2.2.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4818561 HR-TB lineage4 None
SRR5341453 Sensitive None
SRR5341366 Sensitive lineage4 None
ERR2512770 Other lineage4.2.1 None
ERR4819314 Other lineage1.1.1 None
SRR5341387 Other lineage4 None
SRR5341396 Other lineage4 None
ERR4819546 HR-TB lineage3 None
SRR5341425 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341456 Other None