Rv0006 - c.-278G>C


Drug resistance types
46 Sensitive 1 RR-TB 9 HR-TB 8 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.9 50
lineage4.1.2.1 3
lineage5.1.2 1
1
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1;lineage4 1
lineage4 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage6.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1 6
lineage4.6.3;lineage4.9 1
lineage1.1.1 1
La1.7;lineage4.9 2
lineage4.1.1.3;lineage4.9 1
lineage4.7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 93
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
ERR400538 RR-TB lineage5.1.2 None
ERR373946 Sensitive lineage4.9 None
SRR12708416 Sensitive None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363421 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR363474 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6046802 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023236 Other lineage6.1.3 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4829335 Sensitive lineage4.7 None
SRR9971114 Other lineage2.2.1 None
SRR3675580 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363479 Sensitive lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR349299 Other lineage4.9 None
SRR30182372 Sensitive lineage2.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR1183145 Other lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045503 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR363498 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None