EBG00000313325 - n.442C>T
Drug resistance types
51 Sensitive
6 RR-TB
58 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 1 |
| 52 | |
| lineage4.2.1 | 3 |
| lineage4.9 | 25 |
| La1.4 | 1 |
| lineage2.2.1 | 11 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 4 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2 | 4 |
| lineage4 | 33 |
| lineage4.3.4.2 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.3.3 | 2 |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.8 | 4 |
| lineage2.1 | 1 |
| lineage3 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.2 | 1 |
| La1.2 | 3 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 2 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13888750 | Other | La2 | None | SRR14782405 | HR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16156775 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR21710926 | Sensitive | lineage4.3.4.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR26937039 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341313 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046299 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5087596 | Other | La1.8.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | DRR188519 | Other | lineage4.4.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR8866476 | Sensitive | lineage4.3.4.2 | None | ERR323045 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797068 | Other | La1.8.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4187652 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR4812155 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR752229 | Other | lineage4.5 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9119669 | HR-TB | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None |
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