lineage | Count |
---|---|
32 | |
lineage4.3.4.2.1 | 1 |
lineage3.1 | 2 |
lineage4 | 12 |
lineage4.9 | 26 |
La1.8.1 | 2 |
lineage4.1.2.1 | 2 |
lineage2.2.1 | 5 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage2.2.1.1 | 4 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.2;La1.7 | 1 |
La1.7.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | ERR067681 | HR-TB | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR502889 | Other | None | ERR1034634 | HR-TB | None | ERR3283040 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR133986 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR6359045 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR3675488 | HR-TB | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675222 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR3675571 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | SRR5341418 | Other | None | ERR4819357 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6046824 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None |
---|