Rv0006 - c.1270C>T
Drug resistance types
31 Sensitive
5 RR-TB
23 HR-TB
15 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 51 |
| La1.7 | 2 |
| lineage4.3.3 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 9 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.3.2.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323066 | Sensitive | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR5341373 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR15315747 | Sensitive | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1023509 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
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