Rv0668 - c.1284G>C
Drug resistance types
39 Sensitive
52 RR-TB
22 HR-TB
15 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 54 |
| lineage4.3.3 | 5 |
| 19 | |
| La1.8.1 | 3 |
| lineage4 | 9 |
| La1.3 | 7 |
| lineage3.1.1 | 7 |
| lineage4.9;La1.3 | 1 |
| lineage4.1.1 | 3 |
| lineage2.2 | 3 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1 | 21 |
| lineage4.7 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
| La2 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.4.1.1 | 5 |
| lineage3.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.1 | 3 |
| lineage3 | 17 |
| lineage1.1.3.1 | 2 |
| lineage4.8 | 11 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| La1.8.2 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.1.2.1 | 13 |
| lineage5 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.5 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.2.1.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 235 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR4769517 | Other | La1.3 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | ERR4798406 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR21279370 | HR-TB | lineage2.2 | None | ERR158583 | HR-TB | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815772 | Other | lineage4.4.1.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4815777 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814748 | Other | lineage4.8 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815909 | Other | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675550 | Other | None | ERR4816227 | RR-TB | lineage3 | None | ERR4817069 | RR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816631 | Other | lineage2.2.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816756 | RR-TB | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR2513398 | Other | lineage4.2.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820324 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819328 | Sensitive | lineage4.3.3 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514834 | Other | lineage4.7 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819730 | Other | lineage4.8 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820784 | Sensitive | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820833 | HR-TB | None | ERR2515032 | Other | lineage3 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046729 | Other | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046482 | HR-TB | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046824 | HR-TB | None | SRR6046815 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | ERR067681 | HR-TB | None |
|---|
