Rv0668 - c.1398G>C
Drug resistance types
3 Sensitive
11 RR-TB
7 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.8 | 6 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 6 |
| lineage3 | 1 |
| lineage4.9 | 4 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.5 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.8.1 | 2 |
| lineage4.4.1.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR3675446 | RR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR5311077 | Other | La1.8.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
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