lineage | Count |
---|---|
101 | |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 2 |
lineage4.3.4 | 1 |
lineage4.3 | 1 |
lineage4.9 | 9 |
lineage4.8 | 1 |
lineage2.2.1 | 7 |
lineage4 | 4 |
lineage2.2 | 4 |
lineage4.2.1.1 | 1 |
La2 | 1 |
lineage4.4.1.2 | 1 |
La1 | 1 |
La1.2 | 1 |
lineage3.1.2 | 1 |
lineage6.1.3 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1.2 | 2 |
lineage2.2.1.1 | 2 |
lineage1.1.1 | 1 |
lineage9;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 145 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675482 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | ERR181744 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675502 | Other | None | SRR3675510 | Other | None | SRR3675555 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | SRR5341456 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045399 | Other | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4830353 | Other | None | SRR6046362 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR294266 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR323039 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR3283032 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR4798406 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4811493 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736865 | HR-TB | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None |
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