Rv0668 - c.1386C>T
Drug resistance types
13 Sensitive
18 RR-TB
41 HR-TB
10 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| 30 | |
| lineage4 | 17 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8 | 4 |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 26 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
| lineage3 | 7 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 10 |
| lineage4.2.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.2 | 1 |
| La1.8.1 | 2 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4 | 1 |
| La1.2 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR1035162 | Other | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR502889 | Other | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | DRR184629 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323045 | HR-TB | None | ERR037234 | Sensitive | lineage4.9 | None | ERR323107 | Other | lineage4 | None | DRR185024 | Other | lineage2.2.2 | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3445501 | HR-TB | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4798406 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | ERR176778 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR23961549 | Other | La1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | ERR176779 | HR-TB | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675502 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None |
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