Rv0006 - c.1308G>C


Drug resistance types
43 Sensitive 5 RR-TB 16 HR-TB 17 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 40 Other
lineage Counts
lineage Count
lineage4.9 45
lineage4.8 2
lineage4.1;lineage4.9 2
lineage1.1.2 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage3 2
M.canetti;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1 15
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 2
La1.7;lineage4.2 1
lineage2.2.1.1 5
La1.7;M.canetti;lineage4.9 3
M.canetti;lineage4.2 1
lineage5.1.4 1
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage2.2 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.2.1;lineage4 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;lineage4.9 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage2.2;lineage4 1
La3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4.3.4.1 1
lineage6.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage3;lineage4.9 1
lineage4 1
La1.7;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 123
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341345 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
SRR10809074 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6152731 Sensitive lineage3 ca
SRR6045399 Other M.canetti;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR926164 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR1034634 HR-TB lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR29050859 Other lineage4.9 None
ERR4831810 MDR-TB lineage2.2.1 vn
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4796929 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR10808730 Other lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR5067481 MDR-TB lineage2.2.1 vn
SRR5341373 Other lineage4.9 None
SRR28351347 Other lineage3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4831832 MDR-TB lineage2.2.1 vn
SRR1181251 Other lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045010 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR369158 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR926158 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR926163 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR3675229 Sensitive lineage4.9 None
ERR4831608 MDR-TB lineage2.2.1 vn
ERR4797193 HR-TB lineage1.1.2 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6045706 Sensitive lineage4.9 None
SRR26937063 MDR-TB lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR926156 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR2514327 HR-TB lineage4.8 None
SAMN02585910 Other lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4831802 MDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None