Rv1630 - c.309C>G
Drug resistance types
46 Sensitive
13 RR-TB
12 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage2.2.1;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.9 | 55 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1 | 9 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.8 | 1 |
| lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.9.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| SRR9971150 | RR-TB | lineage4.8.1 | None |
| ERR4769508 | RR-TB | lineage4.9 | None |
| SRR12708407 | HR-TB | lineage4.3.2.1 | None |
| SRR1175487 | Sensitive | lineage4.9 | None |
| ERR1063855 | Other | lineage4.9 | None |
| ERR4819933 | Sensitive | lineage4.9 | None |
| SRR12708392 | Other | lineage2.2.1 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR1180319 | Sensitive | lineage4.9 | None |
| SRR1183054 | Sensitive | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR3797062 | RR-TB | lineage4.9 | None |
| SRR1175512 | Sensitive | lineage4.9 | None |
| SRR28119843 | Sensitive | lineage4.9 | None |
| SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR736831 | Other | lineage4.9 | None |
| SRR1181402 | Sensitive | lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR1175513 | Sensitive | lineage4.9 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR6045832 | Other | lineage4.9 | None |
| SRR1175506 | Sensitive | lineage4.9 | None |
| SRR1181325 | Sensitive | lineage4.9 | None |
| SRR14782539 | MDR-TB | lineage4.2.1 | None |
| ERR4818646 | Sensitive | lineage4.1.2.1 | None |
| SRR12708409 | HR-TB | lineage4.3.3 | None |
| SRR1180345 | Other | lineage4.9 | None |
| ERR4815079 | RR-TB | lineage3 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| ERR736837 | Pre-XDR-TB | lineage4.9 | None |
| SRR12708415 | HR-TB | lineage2.2.1 | None |
| SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None |
| SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
| SRR1184021 | Sensitive | lineage4.9 | None |
| SRR10315751 | MDR-TB | lineage4.8 | None |
| SRR1180148 | Sensitive | lineage4.9 | None |
| SRR1180420 | Sensitive | lineage4.9 | None |
| SRR11662694 | Other | lineage4.9 | None |
| SRR1181283 | Sensitive | lineage4.9 | None |
| ERR6866125 | Sensitive | lineage4.1.2.1 | None |
| SRR1180977 | Sensitive | lineage4.9 | None |
| ERR323037 | Other | lineage4.9 | None |
| SRR1181349 | Sensitive | lineage4 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR16156697 | RR-TB | lineage2.2.1 | None |
| SRR1180399 | Sensitive | lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| SRR1183145 | Other | lineage2.2.1 | None |
| ERR6359070 | Sensitive | lineage4.9 | None |
| ERR4818536 | Other | lineage4.9 | None |
| SRR12708396 | MDR-TB | lineage4.3.2.1 | None |
| ERR4769530 | RR-TB | lineage4.9 | None |
| ERR4815471 | Sensitive | lineage4.9 | None |
| SRR1180410 | Sensitive | lineage4.9 | None |
| SRR1180250 | Other | lineage4.9 | None |
| SRR1175052 | HR-TB | lineage4.9 | None |
| SRR1180406 | Sensitive | lineage4.9 | None |
| SRR12708414 | HR-TB | lineage2.2.1 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR28119823 | Sensitive | lineage4.9 | None |
| SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
| SRR1172807 | Sensitive | lineage4.9 | None |
| SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None |
| SRR1180444 | Sensitive | lineage4.9 | None |
| SRR1180946 | Sensitive | lineage2;lineage4.9 | None |
| SRR12708413 | HR-TB | lineage4.1.1.3 | None |
| SRR12708418 | HR-TB | lineage2.2.1 | None |
| ERR6359066 | HR-TB | lineage4.9 | None |
| ERR4816964 | Sensitive | lineage4.9 | None |
| SRR16156188 | Sensitive | lineage4.9 | None |
| ERR6359069 | Sensitive | lineage4.9 | None |
| SRR12708411 | HR-TB | lineage1.2.2.2 | None |
| SRR1172885 | HR-TB | lineage4.9 | None |
| SRR21677886 | Sensitive | lineage4.9 | None |
| SRR6832249 | Sensitive | lineage2.2.1 | None |
| ERR11465189 | RR-TB | lineage4.9.1 | None |
| SRR1180413 | Sensitive | lineage4.9 | None |
| SRR1180147 | Other | lineage2.2.1.1 | None |
| SRR1181351 | Sensitive | lineage4.9 | None |
| ERR3283006 | RR-TB | lineage4.9 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4819462 | Sensitive | lineage4.9 | None |
| SRR1180355 | Sensitive | lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR6832787 | Sensitive | lineage2.2.1 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| SRR1180312 | Sensitive | lineage4.9 | None |
| SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| SRR6046141 | Other | lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR1181403 | Other | lineage4.9 | None |
| SRR1180375 | Sensitive | lineage4.9 | None |
| SRR1180300 | Sensitive | lineage4.9 | None |
| SRR1180391 | Sensitive | lineage4.9 | None |
