Rv0486 - c.342G>C
Drug resistance types
50 Sensitive
3 RR-TB
132 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| 135 | |
| lineage4.3.4 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.9 | 19 |
| lineage4 | 53 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 12 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2 | 5 |
| La1 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 259 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675234 | Other | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176643 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4816656 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR1035162 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341453 | Sensitive | None | ERR4818929 | HR-TB | None | SRR5341387 | Other | lineage4 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | ERR1023509 | Other | None | SRR5341330 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045952 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046362 | HR-TB | None | SRR6046046 | Other | None | SRR6045399 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | ERR5311081 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283028 | Other | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861153 | Other | lineage4.9 | None | SRR13837666 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861332 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR8692887 | Other | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176779 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None |
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