Rv0006 - c.1494C>T


Drug resistance types
24 Sensitive 5 RR-TB 12 HR-TB 84 MDR-TB 19 Pre-XDR-TB 3 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 126
lineage4.3.4 1
lineage4.3.2;lineage4.3.4.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 4
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1;lineage4.3.4.2.1 2
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3;lineage4.3.4.2.1 2
M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.1.1 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11252568 MDR-TB lineage4.3.4.2.1 None
ERR11252494 MDR-TB lineage4.3.4.2.1 None
ERR161038 Sensitive lineage4.3.4.2.1 mw
ERR11489037 MDR-TB lineage4.3.4.2.1 None
SRR6982245 Other lineage4.3.4.2.1 None
ERR9992705 XDR-TB lineage4.3.4.2.1 None
ERR2199989 HR-TB lineage4.3.4.2.1 sz
ERR11488335 Other lineage4.3.4.2.1 None
ERR11488565 MDR-TB lineage4.3.4.2.1 None
ERR2433013 Pre-XDR-TB lineage4.3.4.2.1 None
ERR2433004 HR-TB lineage4.3.4.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR552992 MDR-TB lineage4.3.4.2.1 None
ERR11488370 MDR-TB lineage4.3.4.2.1 None
ERR11488443 MDR-TB lineage4.3.2;lineage4.3.4.2.1 None
ERR11489038 MDR-TB lineage4.3.4.2.1 None
ERR11488562 MDR-TB lineage4.3.4.2.1 None
ERR11488515 MDR-TB lineage4.3.4.2.1 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176624 Sensitive lineage4.3.4.2.1 mw
ERR9992657 XDR-TB lineage4.3.4.2.1 None
ERR11488749 MDR-TB lineage4.3.4.2.1 None
ERR11488544 MDR-TB lineage4.3.4.2.1 None
ERR11488837 MDR-TB lineage4.3.4.2.1 None
ERR182007 Sensitive lineage4.3.4.2.1 mw
ERR11488994 MDR-TB lineage4.3.4.2.1 None
SRR6832787 Other lineage2.2.1 None
ERR11488411 MDR-TB lineage4.3.4.2.1 None
ERR473339 Sensitive lineage4.3.4.2.1 None
ERR11488500 MDR-TB lineage4.3.4.2.1 None
ERR3509865 HR-TB lineage4.3.4.2.1 None
ERR3509860 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488488 MDR-TB lineage4.3.4.2.1 None
ERR11488845 MDR-TB lineage4.3.4.2.1 None
ERR11488655 MDR-TB lineage4.3.4.2.1 None
ERR7821142 Other lineage4.3.4.2.1 None
ERR11488643 MDR-TB lineage4.3.4.2.1 None
ERR275201 HR-TB lineage4.3.4.2.1 pt
ERR11488773 MDR-TB lineage4.3.4.2.1 None
ERR11488383 MDR-TB lineage4.3.4.2.1 None
ERR11488931 XDR-TB lineage4.3.4.2.1 None
ERR1035213 HR-TB lineage4.3.4.2.1 pt
SRR2101758 Other lineage4.3.4.2.1 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11488400 MDR-TB lineage4.3.4.2.1 None
ERR11488620 MDR-TB lineage4.3.4.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11488684 MDR-TB lineage4.3.4.2.1 None
ERR11488671 Pre-XDR-TB lineage4.3.4.2.1 None
SRR19428566 Sensitive lineage4.3.4.2.1 None
ERR11488532 MDR-TB lineage4.3.4.2.1 None
ERR11488450 MDR-TB lineage4.3.4.2.1 None
ERR2433006 HR-TB lineage4.3.4.2.1 br
SRR6981920 Sensitive lineage4.3.4.2.1 None
ERR161194 Sensitive lineage2.2.1;lineage4.3.4.2.1 mw
ERR11488772 MDR-TB lineage4.3.4.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR8975185 Sensitive lineage4.3.4.2.1 None
ERR11489063 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488575 Pre-XDR-TB lineage4.3.4.2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR495193 Sensitive lineage4.3.4.2.1 None
ERR495080 Sensitive lineage4.3.4.2.1 None
ERR1193891 HR-TB lineage4.3.4.2.1 sz
ERR11488706 Pre-XDR-TB lineage4.3.4.2.1 None
ERR552990 MDR-TB lineage4.3.4.2.1 None
ERR11488728 Pre-XDR-TB lineage4.3.4.2.1 None
ERR3509866 HR-TB lineage4.3.4.2.1 None
SRR2101604 Sensitive lineage4.3.4.2.1 None
ERR11488996 MDR-TB lineage4.3.4.2.1 None
ERR8975404 Sensitive lineage4.3.4.2.1 None
ERR2433007 MDR-TB lineage4.3.4.2.1 None
ERR279512 Sensitive lineage4.3.4.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6982302 Sensitive lineage4.3.4.2.1 None
ERR11488691 MDR-TB lineage4.3.4.2.1 None
ERR11489062 MDR-TB lineage4.3.4.2.1 None
SRR6824532 Pre-XDR-TB lineage2.2.1 cn
ERR161027 Sensitive lineage4.3.4.2.1 mw
ERR11489028 Pre-XDR-TB lineage4.3.4.2.1 None
ERR3509849 HR-TB lineage4.3.4.2.1 None
ERR2515483 Other lineage4.3.4.2.1 za
ERR11466345 Sensitive lineage4.3.4.2.1 None
ERR11488566 MDR-TB lineage4.3.4.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR11488440 MDR-TB lineage4.3.4.2.1 None
ERR1633855 Sensitive lineage4.3.4.2.1 za
ERR8975946 MDR-TB lineage4.3.4.2.1 None
ERR3509857 MDR-TB lineage4.3.4.2.1 None
ERR11488776 MDR-TB lineage4.3.4.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR11488555 MDR-TB lineage4.3.4.2.1 None
SRR2101151 Sensitive lineage3;lineage4.3.4.2.1 None
ERR11488334 MDR-TB lineage4.3.4.2.1 None
ERR11488856 MDR-TB lineage4.3.4.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR11488496 MDR-TB lineage4.3.4.2.1 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR11488768 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488449 MDR-TB lineage4.3.4.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR11488724 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488554 MDR-TB lineage4.3.4.2.1 None
ERR11488834 MDR-TB lineage4.3.4.2.1 None
ERR11488758 MDR-TB lineage4.3.4.2.1 None
ERR2515266 RR-TB lineage4.3.4.2.1 za
ERR11488373 MDR-TB lineage4.3.4.2.1 None
ERR11488709 Pre-XDR-TB lineage4.3.4.2.1 None
ERR3509850 MDR-TB lineage4.3.4.2.1 None
ERR11488911 MDR-TB lineage4.3.4.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6855895 Other lineage4.3.4.2.1 None
ERR279549 Sensitive lineage4.3.4.2.1 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR11488807 MDR-TB lineage4.3.4.2.1 None
ERR11488538 MDR-TB lineage4.3.4.2.1 None
ERR8975694 Pre-XDR-TB lineage4.3.4.2.1 None
ERR330713 Sensitive lineage3;lineage4.3.4.2.1 None
ERR552991 MDR-TB lineage4.3.4.2.1 None
ERR11488782 MDR-TB lineage4.3.4.2.1 None
ERR2433009 Pre-XDR-TB lineage4.3.4.2.1 None
SRR1723570 Pre-XDR-TB lineage2.2.1 cn
ERR1193892 MDR-TB lineage4.3.4.2.1 sz
ERR161039 HR-TB La3;lineage4.3.4 None
ERR2433011 MDR-TB lineage4.3.4.2.1 None
ERR11488512 MDR-TB lineage4.3.4.2.1 None
ERR11488917 MDR-TB lineage4.3.4.2.1 None
ERR11488523 MDR-TB lineage4.3.4.2.1 None
ERR2433003 MDR-TB lineage4.3.4.2.1 br
ERR161193 Sensitive lineage4.3.4.2.1 mw
ERR11488746 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488882 MDR-TB lineage4.3.4.2.1 None
ERR3509858 MDR-TB lineage2.2.1;lineage4.3.4.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR10306027 Pre-XDR-TB lineage2.2.1 None
ERR11488553 Pre-XDR-TB lineage4.3.4.2.1 None
ERR11488408 MDR-TB lineage4.3.4.2.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR11488549 MDR-TB lineage4.3.4.2.1 None
ERR11488995 MDR-TB lineage4.3.4.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR21732383 Sensitive lineage4.3.4.2.1 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11488737 Pre-XDR-TB lineage4.3.4.2.1 None
ERR8975139 Sensitive lineage4.3.4.2.1 None
ERR3509862 MDR-TB lineage4.3.4.2.1 None
ERR11488452 MDR-TB lineage4.3.4.2.1 None
ERR11488676 MDR-TB lineage4.3.4.2.1 None
ERR11488978 MDR-TB lineage4.3.4.2.1 None
ERR11488474 MDR-TB lineage4.3.4.2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11488340 MDR-TB lineage4.3.4.2.1 None
ERR11488635 MDR-TB lineage4.3.4.2.1 None
ERR3509864 MDR-TB lineage4.3.4.2.1 None
ERR4808930 Sensitive lineage4.3.4.2.1 za
SRR27450124 HR-TB lineage1.1.1.1 None