Rv0668 - c.975C>T


Drug resistance types
108 Sensitive 18 RR-TB 97 HR-TB 41 MDR-TB 39 Pre-XDR-TB 0 XDR-TB 54 Other
lineage Counts
lineage Count
59
lineage2.2.1 52
lineage2.2.1.1 3
lineage4.1 1
lineage5.1.1 1
lineage4 91
lineage4.7 2
lineage4.1.2 4
lineage4.8 4
lineage4.3.2.1 1
lineage4.3.3 1
lineage4.9 40
lineage4.1.2.1 3
lineage1.1.2 2
La1.2 1
lineage4.5;lineage2.2.1 1
lineage1.1.3.1 1
lineage4.1.1.3 1
lineage4.6.2.2 2
lineage6.1.3 1
lineage2.2 23
lineage4.5 4
lineage4.6.5 1
lineage4.3.4.2 1
lineage2.2.2 18
lineage3 12
lineage4;lineage2.2.2 1
lineage4.4.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.9;lineage2 1
lineage4.8;lineage4.3.3 4
La1.6 1
lineage4.2.1 3
lineage7;lineage2.2.1.2 1
La1.8.1 2
lineage4.3.4 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 1
lineage1.2.1.1 1
lineage4.3.4.2.1 2
lineage3.1.2.1 1
lineage3.1.3 1
lineage4.1.1.2 1
lineage4.9;lineage2.1 1
lineage4.9;lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 357
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831117 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR6981961 Sensitive lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502889 Other None
SRR9971112 Other lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970980 Other lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063883 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
SRR9971113 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR323068 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR133986 HR-TB None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283032 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283033 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR349264 Sensitive lineage4 None
ERR3439432 Other None
ERR3445504 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR3797046 HR-TB None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797062 RR-TB lineage4.9 None
ERR4024991 Other None
ERR4178309 Other lineage4.1.2.1 None
ERR405191 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR4596910 Sensitive lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4796351 MDR-TB lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797184 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR6198317 Other La1.2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4811493 HR-TB None
ERR4798406 HR-TB None
ERR6358979 Other None
ERR6865502 Sensitive lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9787256 Other lineage6.1.3 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR773806 Sensitive lineage2.2.1 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR987707 MDR-TB lineage4.7 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013583 HR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013584 HR-TB lineage2.2 None
SRR1013597 HR-TB lineage2.2 None
SRR1013596 HR-TB lineage3 None
SRR1013595 HR-TB lineage3 None
SRR1013607 HR-TB lineage2.2 None
SRR1013599 HR-TB None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013598 HR-TB None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013610 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013612 HR-TB lineage4 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013608 HR-TB lineage2.2 None
SRR1013614 HR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013618 MDR-TB None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048885 MDR-TB None
SRR1048886 MDR-TB lineage2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048982 HR-TB None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048988 HR-TB lineage2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048993 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1048994 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1062928 RR-TB lineage4 None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049027 Pre-XDR-TB None
SRR1049041 MDR-TB None
SRR1049672 Other lineage3 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR10993951 RR-TB La1.6 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1158918 Sensitive lineage4 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1172885 HR-TB lineage4.9 None
SRR1173310 MDR-TB None
SRR1173185 HR-TB lineage4.9 None
SRR1173450 RR-TB lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173515 HR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173568 Other lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1175052 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR16156832 RR-TB None
SRR1791747 Other La1.8.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR20632814 Sensitive lineage4 None
SRR21677886 Sensitive lineage4.9 None
ERR158583 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675502 Other None
ERR702405 Sensitive lineage2.1 None
SRR3675209 Sensitive lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR181744 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675292 Sensitive lineage4 None
ERR4815079 RR-TB lineage3 None
SRR3675246 Sensitive lineage4 None
SRR3675265 Other lineage4 None
SRR3675510 Other None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR4816151 Other lineage4.8 None
ERR212123 Other None
SRR3675550 Other None
ERR4816470 Other lineage3 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR5341384 Sensitive lineage4.9 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR4816734 Sensitive lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816729 Sensitive lineage4.9 None
SAMN02398710 MDR-TB lineage2.2.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR4035804 Sensitive lineage4.1.2 None
ERR4817998 Other lineage3 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR1873537 Pre-XDR-TB lineage2.2.1 za
ERR2513121 Sensitive lineage3.1.3 None
ERR4818086 Sensitive lineage4.8 None
ERR4818252 Other lineage4.1.1.2 None
ERR1035162 Other None
SAMN02360580 HR-TB lineage2.2.1 None
SRR5341396 Other lineage4 None
SRR4035807 HR-TB lineage4.1.2 None
ERR2513259 Other lineage3 None
SRR5341387 Other lineage4 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SAMN02360577 HR-TB lineage3 None
SRR5341453 Sensitive None
SRR5341456 Other None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341425 Other lineage4 None
ERR4819383 RR-TB lineage4.9 None
SRR5341418 Other None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
ERR1023509 Other None
SRR5341310 Other lineage1.1.2 None
SRR5341330 HR-TB None
SRR5341303 RR-TB lineage4 None
SRR5341323 Sensitive lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341366 Sensitive lineage4 None
SAMN02360585 HR-TB lineage4.5 None
SRR5341467 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5341469 Other lineage4 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4821811 RR-TB lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR4821057 HR-TB lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045892 Sensitive None
ERR4821550 Other lineage2.2.1 None
SRR6045706 Sensitive lineage4 None
SRR6045503 HR-TB None
ERR4821172 RR-TB lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046250 Other lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046482 HR-TB None
ERR2851356 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046460 HR-TB None
SRR6046362 HR-TB None
SRR6046824 HR-TB None
SRR6046492 Other None
SRR6046802 Other lineage4 None
SRR6046897 Sensitive lineage4 None
SRR6511621 HR-TB None