Rv0668 - c.975C>T
Drug resistance types
108 Sensitive
18 RR-TB
97 HR-TB
41 MDR-TB
39 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| 59 | |
| lineage2.2.1 | 52 |
| lineage2.2.1.1 | 3 |
| lineage4.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4 | 91 |
| lineage4.7 | 2 |
| lineage4.1.2 | 4 |
| lineage4.8 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9 | 40 |
| lineage4.1.2.1 | 3 |
| lineage1.1.2 | 2 |
| La1.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2 | 23 |
| lineage4.5 | 4 |
| lineage4.6.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 18 |
| lineage3 | 12 |
| lineage4;lineage2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.9;lineage2 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| La1.6 | 1 |
| lineage4.2.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 357 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR405191 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR6198317 | Other | La1.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4798406 | HR-TB | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013618 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048885 | MDR-TB | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049672 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR16156832 | RR-TB | None | SRR1791747 | Other | La1.8.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675502 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675510 | Other | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816151 | Other | lineage4.8 | None | ERR212123 | Other | None | SRR3675550 | Other | None | ERR4816470 | Other | lineage3 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4816734 | Sensitive | lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR4035804 | Sensitive | lineage4.1.2 | None | ERR4817998 | Other | lineage3 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873537 | Pre-XDR-TB | lineage2.2.1 | za | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR1035162 | Other | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR4035807 | HR-TB | lineage4.1.2 | None | ERR2513259 | Other | lineage3 | None | SRR5341387 | Other | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5341453 | Sensitive | None | SRR5341456 | Other | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341418 | Other | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341330 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | ERR4821057 | HR-TB | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045892 | Sensitive | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046482 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046492 | Other | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None |
|---|
