DRR041784
|
Sensitive
|
lineage2.2.1
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9119239
|
Other
|
lineage4.8
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
DRR041783
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
DRR041786
|
Sensitive
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR27450253
|
Sensitive
|
lineage4.8
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
DRR189031
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR6045399
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR13262250
|
Sensitive
|
lineage2.2.1
|
None
|
DRR473950
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13243574
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13245778
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4822363
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
DRR034450
|
Sensitive
|
lineage2.2.1
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR21576684
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
DRR189089
|
Sensitive
|
lineage2.2.1
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR28339293
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR212001
|
HR-TB
|
|
None
|
DRR473772
|
Sensitive
|
lineage2.2.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR6832787
|
Sensitive
|
lineage2.2.1
|
None
|
DRR474131
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR13246476
|
Sensitive
|
lineage2.2.1
|
None
|
DRR034367
|
Sensitive
|
lineage2.2.1
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR26937005
|
MDR-TB
|
lineage4.8
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
DRR188480
|
Sensitive
|
lineage2.2.1
|
None
|
DRR130063
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
DRR474098
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
DRR041785
|
Sensitive
|
lineage2.2.1
|
None
|
DRR474061
|
Other
|
lineage2.2.1
|
None
|
ERR4831946
|
HR-TB
|
lineage4.8
|
vn
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR21733183
|
RR-TB
|
lineage1.1.2
|
None
|
DRR041788
|
Sensitive
|
lineage2.2.1
|
None
|
DRR130189
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
DRR188543
|
Sensitive
|
lineage2.2.1
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR27450220
|
Sensitive
|
lineage4.8
|
None
|
SRR16057932
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
DRR188974
|
Sensitive
|
lineage2.2.1
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR3675441
|
Other
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR16103896
|
RR-TB
|
lineage2.2.1
|
None
|
SRR3675456
|
RR-TB
|
lineage4.9;lineage7
|
None
|
SRR28868888
|
Other
|
lineage1.1.3.2
|
None
|
DRR474005
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14164592
|
Sensitive
|
lineage2.2.1
|
None
|
DRR130182
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR130213
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR188489
|
Sensitive
|
lineage2.2.1
|
None
|
DRR034470
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR28339294
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR5065492
|
HR-TB
|
lineage4.8
|
vn
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR13290931
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR189067
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR041789
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR4830185
|
Other
|
lineage4.8
|
vn
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR2199988
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR550637
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
DRR473935
|
Sensitive
|
lineage2.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR26399214
|
Other
|
lineage4.8
|
None
|
SRR28859791
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
SRR3675446
|
RR-TB
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
DRR188680
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR5217423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
DRR474157
|
Sensitive
|
lineage2.2.1
|
None
|
SRR28339303
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR130157
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR9125836
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR13290708
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18910156
|
RR-TB
|
lineage2.2.1
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR4832042
|
HR-TB
|
lineage4.8
|
vn
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR28339304
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13292182
|
RR-TB
|
lineage2.2.1
|
None
|
ERR13290690
|
RR-TB
|
lineage2.2.1
|
None
|
ERR13290793
|
RR-TB
|
lineage2.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
DRR041787
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
DRR188956
|
Sensitive
|
lineage2.2.1
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|