Rv0006 - c.1212C>G
Drug resistance types
70 Sensitive
5 RR-TB
68 HR-TB
11 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 45 |
| 64 | |
| lineage2.2 | 5 |
| lineage4 | 47 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.8 | 10 |
| lineage4.3.2.1 | 1 |
| lineage4.9 | 10 |
| La1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.1 | 2 |
| lineage4.2;La1.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR473772 | Sensitive | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | DRR474157 | Sensitive | lineage2.2.1 | None | DRR474131 | Sensitive | lineage2.2.1 | None | SRR8217918 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | DRR473935 | Sensitive | lineage2.2.1 | None | DRR473950 | HR-TB | lineage2.2.1 | None | DRR474005 | HR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323045 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | DRR034470 | Sensitive | lineage2.2.1 | None | DRR034450 | Sensitive | lineage2.2.1 | None | DRR034367 | Sensitive | lineage2.2.1 | None | DRR041789 | Sensitive | lineage2.2.1 | None | DRR041787 | Sensitive | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | DRR041784 | Sensitive | lineage2.2.1 | None | DRR041783 | Sensitive | lineage2.2.1 | None | DRR041786 | Sensitive | lineage2.2.1 | None | DRR041785 | Sensitive | lineage2.2.1 | None | DRR041788 | Sensitive | lineage2.2.1 | None | DRR130063 | Pre-XDR-TB | lineage2.2.1 | None | DRR130145 | Pre-XDR-TB | lineage2.2.1 | None | DRR130213 | Pre-XDR-TB | lineage2.2.1 | None | DRR130157 | Sensitive | lineage2.2.1 | None | DRR130189 | Pre-XDR-TB | lineage2.2.1 | None | DRR130182 | MDR-TB | lineage2.2.1 | None | DRR188543 | Sensitive | lineage2.2.1 | None | DRR188489 | Sensitive | lineage2.2.1 | None | DRR188480 | Sensitive | lineage2.2.1 | None | ERR133986 | HR-TB | None | DRR188680 | Sensitive | lineage2.2.1 | None | DRR189067 | MDR-TB | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | DRR474061 | Sensitive | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | DRR188974 | Sensitive | lineage2.2.1 | None | DRR189031 | HR-TB | lineage2.2.1 | None | DRR189089 | Sensitive | lineage2.2.1 | None | ERR067681 | HR-TB | None | DRR474098 | Sensitive | lineage2.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4831946 | HR-TB | lineage4.8 | vn | ERR4832042 | HR-TB | lineage4.8 | vn | ERR4799378 | Sensitive | lineage4 | None | ERR4830185 | Other | lineage4.8 | vn | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5217423 | HR-TB | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9125836 | Sensitive | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9119239 | Other | lineage4.8 | None | ERR9119669 | HR-TB | None | SRR1173568 | Other | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14164592 | Sensitive | lineage2.2.1 | None | SRR14801749 | Sensitive | None | ERR702405 | Sensitive | lineage2.1 | None | SRR16057932 | Sensitive | lineage2.2.1 | None | SRR16103896 | RR-TB | lineage2.2.1 | None | SRR27450220 | Sensitive | lineage4.8 | None | SRR26937005 | MDR-TB | lineage4.8 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR27450253 | Sensitive | lineage4.8 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675501 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR18910156 | RR-TB | lineage2.2.1 | None | SRR21576684 | MDR-TB | lineage2.2.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR3675510 | Other | None | ERR212001 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819051 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | SRR5065492 | HR-TB | lineage4.8 | vn | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341315 | Sensitive | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR040122 | MDR-TB | lineage4.8 | ug | SRR6045519 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4822363 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None |
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