Rv0006 - c.1212C>G


Drug resistance types
33 Sensitive 14 RR-TB 58 HR-TB 38 MDR-TB 6 Pre-XDR-TB 2 XDR-TB 38 Other
lineage Counts
lineage Count
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.9 53
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;lineage4.9 4
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 45
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 8
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.2.1 2
lineage2.1;lineage4.9 2
M.canetti;lineage4.9 3
La1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.1.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.3.1 1
2
lineage1.1.2 1
La3;lineage4.9 1
lineage2.2 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
La1.8.1 2
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
La1.7;M.canetti;lineage4.9 3
La1.7.1;La1.7.X-unk4 1
lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage3.1.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.4.2.1 1
lineage4.1.2 1
lineage4.3.3 1
lineage4.9;lineage7 2
lineage6.1.3 1
lineage1;lineage4.9 1
M.canetti;lineage1 1
lineage1.2.1.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1;lineage4.1.2 1
lineage4.9;lineage9 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
M.canetti;lineage2.2 2
M.canetti;lineage4.9;lineage9 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
La2;lineage2.2 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
DRR188956 Sensitive lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
DRR041785 Sensitive lineage2.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4831946 HR-TB lineage4.8 vn
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
DRR189089 Sensitive lineage2.2.1 None
SRR6045347 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
DRR130189 Pre-XDR-TB lineage2.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
DRR189067 MDR-TB lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR27450220 Sensitive lineage4.8 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR16057932 Sensitive lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
DRR130157 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
DRR130182 MDR-TB lineage2.2.1 None
DRR130213 Pre-XDR-TB lineage2.2.1 None
DRR034470 Sensitive lineage2.2.1 None
SRR6045892 Sensitive lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
DRR188489 Sensitive lineage2.2.1 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
DRR474098 Sensitive lineage2.2.1 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
DRR130063 Pre-XDR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
ERR4822363 Pre-XDR-TB lineage2.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
DRR474061 Other lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
DRR189031 HR-TB lineage2.2.1 None
SRR5217423 HR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
DRR188543 Sensitive lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
DRR474131 Sensitive lineage2.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR5341453 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4832042 HR-TB lineage4.8 vn
DRR034450 Sensitive lineage2.2.1 None
DRR188974 Sensitive lineage2.2.1 None
SRR5065492 HR-TB lineage4.8 vn
SRR18910156 RR-TB lineage2.2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
DRR473772 Sensitive lineage2.2.1 None
DRR473950 HR-TB lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR16103896 RR-TB lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR212001 HR-TB None
SRR28339303 Pre-XDR-TB lineage2.2.1 None
ERR6866807 RR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
DRR474005 HR-TB lineage2.2.1 None
DRR041784 Sensitive lineage2.2.1 None
DRR034367 Sensitive lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
DRR474157 Sensitive lineage2.2.1 None
ERR9119239 Other lineage4.8 None
SRR26937005 MDR-TB lineage4.8 None
ERR4830185 Other lineage4.8 vn
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR14164592 Sensitive lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
DRR041787 Sensitive lineage2.2.1 None
DRR473935 Sensitive lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045548 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR27450253 Sensitive lineage4.8 None
ERR4769521 RR-TB lineage4.9 None
DRR188680 Sensitive lineage2.2.1 None
DRR041788 Sensitive lineage2.2.1 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063849 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR4796254 Other lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR9125836 Sensitive lineage2.2.1 None
SRR21576684 MDR-TB lineage2.2.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR10808730 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
DRR041786 Sensitive lineage2.2.1 None
ERR212125 HR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR736834 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
DRR041789 Sensitive lineage2.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR28339304 Pre-XDR-TB lineage2.2.1 None
SRR28339293 MDR-TB lineage2.2.1 None
SRR28339294 MDR-TB lineage2.2.1 None
ERR137286 Other lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
DRR188480 Sensitive lineage2.2.1 None
DRR041783 Sensitive lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR550637 MDR-TB lineage4.1.1.3 None