lineage | Count |
---|---|
22 | |
lineage4.3.4 | 1 |
lineage4.9 | 12 |
lineage4.4.2 | 1 |
lineage2.2.1 | 5 |
lineage4.8 | 2 |
lineage3.1.1 | 2 |
lineage3.1 | 1 |
lineage4.3.3 | 2 |
lineage4.2.1.1 | 2 |
lineage3 | 5 |
lineage4.5 | 1 |
lineage1 | 1 |
lineage4 | 5 |
La1.2 | 1 |
lineage4.9;La1.3 | 1 |
La1.4 | 1 |
spoligotype | Count |
---|---|
None | 65 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675502 | Other | None | ERR158583 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR4815909 | Other | lineage4.8 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4817464 | Other | lineage3.1.1 | None | SRR3675550 | Other | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR212123 | Other | None | SRR3675555 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818126 | RR-TB | lineage1 | None | ERR1035162 | Other | None | ERR4818393 | RR-TB | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341418 | Other | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4821214 | RR-TB | None | ERR4820833 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283008 | Other | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR067681 | HR-TB | None | ERR4769472 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4798406 | HR-TB | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197044 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None |
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