Rv0006 - c.1632G>A
Drug resistance types
22 Sensitive
10 RR-TB
3 HR-TB
14 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 21 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.9 | 6 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.1 | 4 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| M.canetti;lineage4.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815033 | Sensitive | lineage4.8 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR11049239 | Sensitive | lineage4.8 | None | ERR11049632 | Sensitive | lineage4.8 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4817054 | Sensitive | lineage4.8 | gb | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR11050669 | Sensitive | lineage4.8 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR4818241 | Sensitive | lineage4.8 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4820395 | Sensitive | lineage4.8 | None | ERR4821624 | Sensitive | lineage4.8 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR11049240 | Sensitive | lineage4.8 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4831149 | Sensitive | lineage4.8 | de | SRR26112760 | Sensitive | lineage4.8 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3085371 | Sensitive | lineage4.8 | None | ERR4819663 | Sensitive | lineage4.8 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4821227 | Sensitive | lineage4.8 | gb | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR11082093 | Sensitive | lineage4.8 | None | ERR4820350 | Sensitive | lineage4.8 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6832787 | Other | lineage2.2.1 | None | ERR11050398 | Sensitive | lineage4.8 | None | ERR4815419 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR11050372 | Sensitive | lineage4.8 | None |
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