EBG00000313339 - n.1016T>C


Drug resistance types
114 Sensitive 33 RR-TB 32 HR-TB 37 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 98 Other
lineage Counts
lineage Count
La3;lineage4.9 9
lineage4.9 139
La1;lineage2;lineage4.9 1
lineage4.1.3 2
lineage2.2.1 34
La1;lineage4.9 2
lineage4 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.8.1 5
lineage4.3 1
lineage4.3.2.1 2
lineage4.8 12
lineage6 1
lineage4.6.1.1 1
lineage4.3.4.2.1 9
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.8.2;lineage4.9 1
lineage1.1.2 2
lineage3;lineage4 1
La1;lineage4.1.2 1
lineage4.2.1 4
La1.2.BCG 2
lineage4.9.1 1
lineage3.1.3 1
lineage3 7
lineage2.2.1.1 1
La1.7;lineage4.9 2
lineage4.4.1.1.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1.2.1 6
lineage4.3.4.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.3.3 9
lineage2.2.2 1
lineage4.6.2.2 2
lineage4.3;lineage4.9 1
lineage6.1.3 2
lineage5.2 2
lineage5.1.1 2
lineage4.4.2 2
La1.7;lineage3.1;lineage4 1
lineage4.1.1.3 2
lineage1.1.3.1 2
lineage3.1.1 1
lineage4.2.2 1
lineage4.1.2.1;lineage4.9 1
M.canetti;lineage4.2 1
3
lineage4.4.1.1 2
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.8.1 3
lineage2.2;lineage4 1
lineage4.1.2.1;lineage4.4.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
La1.6 1
La3;lineage4 1
lineage2;lineage4.9 1
lineage4.3.4.2 2
lineage4.3.2 1
lineage2.2.1;lineage4.9 2
lineage4.8.2 1
lineage4.1.1.1 2
La2 1
lineage1.1.3.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.3 1
lineage4.4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2;lineage4 1
lineage4.2.1.1 1
lineage3;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.1.2 2
lineage2.2.1;lineage4 1
lineage4.4 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 328
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR10808399 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR18002985 HR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
SRR1183054 Sensitive lineage4.9 None
ERR10796593 Other lineage4.3 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR971389 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR9787362 Sensitive lineage6 None
SRR7535047 RR-TB lineage4.6.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9119120 Other lineage4.8 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR867566 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1173740 Other lineage3;lineage4 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR1180399 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR11465189 RR-TB lineage4.9.1 None
ERR736834 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR9971168 Other lineage4.3.2.1 None
SRR1062918 Other lineage3 None
SRR1181402 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4818904 Other lineage4.8 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR11466514 Sensitive lineage4.3.4.1 None
SRR15315797 RR-TB lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18002941 RR-TB lineage2.2.1 None
ERR4812495 Other lineage4.1.2.1 pe
ERR9787336 RR-TB lineage6.1.3 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1159378 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR702405 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR10796563 Other lineage4.3.3 None
ERR10796563 Other lineage4.3.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
ERR4821704 Other lineage4.3.3 None
ERR6359069 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR502478 RR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6046376 Other lineage3 None
ERR926159 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR502517 Other lineage5.1.1 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5341298 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR2851356 Sensitive lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR10796576 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR4817060 Other None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR3797079 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
SRR1173281 Other lineage3 None
ERR3797087 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR28119827 Other La3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR8692863 Other lineage2.2;lineage4 None
ERR2693252 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4817915 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7236177 Other La1.8.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1180406 Sensitive lineage4.9 None
SRR7755657 Other lineage4.8 None
SRR1173568 Sensitive lineage4.9 None
ERR2514173 Other lineage4.5 gb
ERR4815780 MDR-TB lineage4.1.3 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR10993951 RR-TB La1.6 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6044875 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3283028 Other La3;lineage4 None
ERR1063896 Sensitive None
ERR502474 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1172717 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR10796564 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR4188247 HR-TB lineage4.9 None
ERR6866241 Other lineage4.3.2 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR10796633 Other lineage4.3.4.2 None
ERR4821119 Other lineage4.4.1.1 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR5908124 Other lineage4.8 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR1181251 Other lineage2.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR867574 Other lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
ERR736856 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR16156817 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR6981999 Sensitive lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
ERR502473 RR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR10796617 Other lineage4.3.4.1 None
ERR4820030 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1180977 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR978767 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR926164 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR1173777 Sensitive lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR779852 Sensitive lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4819863 RR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR4830892 Pre-XDR-TB lineage2.2.1 None
SRR1180996 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR8692905 Sensitive None
SRR13423546 Other lineage4.4.2 None
SRR3675502 Sensitive lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR4797474 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1140736 Other lineage4.1.2.1 None
SRR1175513 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR1140716 Other lineage3 None
ERR926157 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR2517074 Pre-XDR-TB lineage3 gb
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR14296220 Other La1.8.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR28119823 Sensitive lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR10796628 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR21240161 Sensitive lineage4.1.2.1 None
DRR184982 Other lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR926162 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR1063883 HR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR4818126 Other lineage1.2.2 None
SRR14801749 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None