Rv1630 - c.672G>C
Drug resistance types
70 Sensitive
36 RR-TB
39 HR-TB
21 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
99 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 126 |
| lineage4.1.1.3 | 1 |
| La1;lineage4.9 | 2 |
| La1.2.BCG;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4 | 5 |
| La3;lineage4.9 | 9 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.2.1 | 16 |
| La1.7;lineage4.9 | 5 |
| lineage4.8 | 18 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 3 |
| lineage2.2.1.1 | 3 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 2 |
| La1.8.1 | 4 |
| lineage2.2;lineage4 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.3 | 4 |
| 1 | |
| lineage6.1.3 | 2 |
| La1.2.BCG | 3 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.2.1 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.2 | 2 |
| M.canetti;lineage4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 270 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044876 | Sensitive | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR736831 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1915479 | Other | La1.2.BCG | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR5341467 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6046210 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR978762 | Other | lineage4.8 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR5341456 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR978752 | Other | lineage4.8 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR926160 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None |
|---|
