EBG00000313339 - n.1060A>T


Drug resistance types
17 Sensitive 3 RR-TB 27 HR-TB 18 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 52 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.9 15
lineage6.1.3 2
lineage2.2.1 14
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2.1 7
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 5
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.3 3
lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 1
lineage4.1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.9 1
lineage4.9;lineage7 2
lineage2.2.2 2
lineage1.1.2 1
lineage3.1.2.2 1
lineage3 4
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.1 4
La3;lineage4.9 1
La1.2 1
lineage4.8 5
lineage6.1.1 2
lineage4.1 1
1
lineage3.1.1 1
lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.7 1
lineage2.2.1;lineage4.1.2.1 1
lineage3.1.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2 1
lineage1.1.1 1
lineage4.6.3;lineage4.9 1
lineage5.2 1
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.9.1 1
La2;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage4.2.1.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR176751 Other lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR6832249 Sensitive lineage2.2.1 None
ERR176740 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1183144 Other lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
SRR18003023 Other lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4819593 Sensitive lineage4.5 None
ERR4815780 MDR-TB lineage4.1.3 None
SRR28119823 Sensitive lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4820736 Sensitive lineage4.1.2.1 gb
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR28119827 Other La3;lineage4.9 None
ERR6198317 Other La1.2 None
ERR4821679 Other lineage4.3.3 None
ERR1023236 Other lineage6.1.3 None
ERR4819324 Other lineage4.8 gb
ERR3799304 Other lineage6.1.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR4815502 Other lineage4.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR987722 MDR-TB None
SRR3675502 Sensitive lineage4.9 None
ERR4817398 Other lineage3.1.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4816856 Other lineage4.1.2.1 None
ERR2513082 Other lineage4.1.2.1 gb
ERR4820151 Other lineage4.8 None
SRR1172310 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR387051 Other lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4818050 Sensitive lineage4.6.2.2 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR3675582 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR4817189 Other lineage4.7 None
ERR4829337 Sensitive lineage4.8 None
SRR1180172 Other lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR28119843 Sensitive lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4818691 Other lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR2514351 Sensitive lineage3 gb
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1183145 Other lineage2.2.1 None
ERR4819166 Other lineage3 gb
SRR14066533 Sensitive lineage1.1.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR2706950 MDR-TB lineage5.2 cd
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR1181251 Other lineage2.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR4819191 Other lineage4.6.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816270 Other lineage4.1.2.1 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None