EBG00000313339 - n.1060A>T


Drug resistance types
17 Sensitive 12 RR-TB 47 HR-TB 8 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 132 Other
lineage Counts
lineage Count
47
lineage4.9 7
lineage1.1.3.1 6
lineage4 5
lineage4.1.2.1 23
lineage4.8 12
lineage2.2.1 25
lineage1.1.2 4
lineage4.2.1.1 2
lineage4.3.3 10
La2 1
lineage1.1.1.1 1
lineage4.1.2.1;lineage2.2.1 1
lineage3 21
lineage4.6.2.2 7
lineage6.1.1 2
lineage3.1.2 1
La1.2 1
lineage4.9.1 1
lineage4.3.4.2.1 1
lineage4.3.2.1 1
lineage6.1.3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.8.1 1
lineage2.2.1.1 4
lineage6.3;lineage4.9;lineage2.1 1
lineage1.1.1 2
lineage2.2.2 1
lineage4.9;lineage4.6.3 1
lineage4.1.1.3 1
lineage4.4.2 2
lineage4.1.3 1
lineage4.6.5 1
lineage4.1 3
lineage4.4.1.1 2
lineage4.2.2.2 1
lineage3.1.1 2
lineage5 1
lineage4.6.1.2 1
lineage4.7 1
lineage2.2 1
lineage4.6 1
lineage4.3.4.2 2
lineage3.1.2.1 1
lineage4.3.2 3
lineage4.1.2 1
lineage4.3.4.1 2
lineage1.1.3.3 1
lineage4.5 1
lineage5.2 1
La3 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 223
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046133 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045399 Other None
SRR6045321 Other lineage1.1.3.1 None
SRR6046208 Other lineage4 None
ERR4829289 Other lineage4.1.2.1 None
ERR4829208 RR-TB lineage4.8 None
SRR6046397 Other None
ERR4829261 Other lineage2.2.1 None
ERR4829337 Other lineage4.8 None
SRR6832249 Other lineage2.2.1 None
SRR6046534 Other lineage1.1.2 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6257083 HR-TB lineage4.3.3 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502532 HR-TB None
ERR502524 HR-TB La2 None
ERR294266 HR-TB None
SRR7131026 Other lineage2.2.1 None
ERR502889 Other None
ERR323039 HR-TB None
SRR8217901 MDR-TB lineage1.1.1.1 None
SRR7131216 Other lineage4.1.2.1 None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR323053 HR-TB None
ERR4819166 Other lineage3 gb
ERR019855 Other lineage3 None
ERR4819324 Other lineage4.8 gb
ERR10796636 Other lineage4.1.2.1 None
ERR1034652 Other None
ERR067681 HR-TB None
ERR2513082 Other lineage4.1.2.1 gb
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR133986 HR-TB None
ERR3797014 Other None
ERR3283024 Other None
ERR3283058 Other lineage4.9 None
ERR3439432 Other None
ERR3797043 HR-TB None
ERR3797017 Other None
ERR3797036 HR-TB None
ERR3797061 Other None
ERR3797044 Other None
ERR2514351 Sensitive lineage3 gb
ERR3801503 Sensitive lineage4.6.2.2 None
ERR387051 HR-TB None
ERR403298 HR-TB lineage4 None
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
ERR3799304 Other lineage6.1.1 None
ERR4798504 Other lineage3 None
ERR4798406 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR6198317 Other La1.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR736865 HR-TB None
ERR245758 Other lineage4.9.1 None
ERR736835 HR-TB None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR9117711 Other lineage4.3.4.2.1 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787014 Other lineage6.1.1 None
SRR1172214 HR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10315635 RR-TB lineage2.2.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1172146 Sensitive lineage4.9 None
ERR987722 HR-TB None
SRR10315588 HR-TB lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1172310 HR-TB None
SRR1180270 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181251 Other lineage2.2.1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR13423583 Pre-XDR-TB lineage2.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR17832802 HR-TB lineage3 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18003023 Other lineage2.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR17658565 Other lineage3 None
SRR19303805 Other lineage4.8 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4815268 Other lineage4.8 None
ERR4815165 Other lineage4.1.2.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR28119823 Sensitive lineage4.9 None
SRR3675475 Other lineage4.1.1.3 None
ERR4815613 Other lineage3 None
SAMN02585910 Other lineage2.2.1 None
ERR158583 HR-TB None
ERR4815301 Other lineage4.4.2 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814362 Other lineage4.8 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814584 Sensitive lineage4.4.2 None
ERR4814763 Other lineage2.2.1 None
ERR4814745 Other lineage4.6.5 None
ERR4814623 Other lineage4.8 None
ERR4815452 Other lineage4.3.3 None
ERR4815467 Other lineage3 None
ERR4819579 HR-TB lineage4.3.3 None
SRR3675234 Other None
ERR1750908 Sensitive lineage4 None
ERR4815502 Other lineage4.1 None
ERR4814841 Other lineage4.1 None
ERR4814911 Other lineage4.3.3 None
ERR4815738 Other lineage3 None
ERR4814952 Sensitive lineage3 None
ERR4814930 Other lineage4.4.1.1 None
SRR3675284 HR-TB lineage4.9 None
ERR4815080 Other lineage4.1.2.1 None
ERR176740 HR-TB None
ERR4815910 Other lineage4.1.2.1 None
ERR176751 HR-TB None
SRR3675502 Other None
ERR4816086 Other lineage4.2.2.2 None
ERR4817464 Other lineage3.1.1 None
ERR4816967 RR-TB lineage5 None
ERR4816232 Other lineage4 None
ERR4816184 Other lineage4.1.2.1 None
SRR3675550 Other None
SRR3675555 HR-TB None
ERR4816243 Sensitive lineage3 None
ERR4816270 Other lineage4.1.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816462 Other lineage4.1.2.1 None
ERR212121 HR-TB None
ERR4816464 Other lineage3 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816477 Other lineage4.8 None
SRR3675571 HR-TB None
ERR4817134 HR-TB lineage2.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4817189 Other lineage4.7 None
ERR4816562 Other lineage4 None
ERR4817398 Other lineage3.1.1 None
ERR4816627 Other lineage2.2 None
ERR4817276 Other lineage2.2.1 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816699 Other lineage4.6 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4817435 Other lineage1.1.3.1 None
ERR4819007 Other lineage2.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4817665 Other lineage4.8 None
ERR4816856 Other lineage4.1.2.1 None
ERR4817703 Other lineage1.1.1 None
ERR4818691 Other lineage4.8 None
ERR2513231 RR-TB lineage4.3.4.2 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818810 Other lineage2.2.1 None
ERR4819078 Other lineage4.3.3 None
ERR4818050 Other lineage4.6.2.2 None
ERR1035162 Other None
ERR4818407 Other lineage4.3.2 None
ERR4818556 Other lineage3 None
ERR4818548 Other lineage4.3.3 None
ERR4818570 Other lineage4.3.3 None
ERR2512872 Sensitive lineage4.2.1.1 None
ERR2512849 RR-TB lineage1.1.3.1 None
ERR4817568 Other lineage4.1.2.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR2512941 Other lineage1.1.2 None
ERR2513743 Other lineage4.1.2 None
ERR4819191 Other lineage4.6.2.2 None
ERR4819269 Sensitive lineage3 None
ERR4819058 HR-TB lineage3 None
ERR4819192 Other lineage3 None
ERR4820720 Other lineage4.1.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819528 RR-TB lineage3 None
ERR4819287 Other lineage1.1.3.3 None
SRR5341418 Other None
ERR2515032 Other lineage3 None
ERR4820746 RR-TB lineage3 None
ERR4819593 Other lineage4.5 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819550 Other lineage3 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR2514645 Other lineage4.3.4.1 None
ERR4820817 Other lineage4.1.2.1 None
ERR4820833 HR-TB None
ERR2706950 MDR-TB lineage5.2 cd
ERR4821092 Sensitive lineage4.1 None
ERR4821829 Other lineage1.1.2 None
ERR4821093 Other lineage4.3.3 None
ERR4820151 RR-TB lineage4.8 None
ERR4820194 Other La3 None
ERR4821769 Other lineage4.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR2693231 Other None
SRR5341470 HR-TB None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR2693230 Other None
ERR2693257 Other None
ERR2693254 Other None
ERR4821526 Other lineage4.3.2 None
ERR4821906 Other lineage4.1.1 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821610 Other lineage4.3.2 None
ERR4821669 Other lineage3 None
SRR6045555 HR-TB None
ERR4821679 Other lineage4.3.3 None