EBG00000313339 - n.1060A>T
Drug resistance types
27 Sensitive
15 RR-TB
54 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
169 Other
lineage Counts
| lineage | Count |
|---|---|
| 47 | |
| La1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.6.2.2 | 12 |
| lineage4.1.2.1 | 31 |
| lineage4.8 | 23 |
| lineage6.1.3 | 1 |
| lineage4.9 | 6 |
| lineage2.2.1 | 30 |
| lineage4.8.1 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage3 | 33 |
| lineage1.1.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1 | 7 |
| lineage4.3.3 | 10 |
| lineage4.6.5 | 1 |
| lineage4.1 | 3 |
| lineage4 | 5 |
| lineage4.4.1.1 | 3 |
| lineage4.2.1 | 2 |
| lineage5 | 1 |
| lineage3.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6 | 1 |
| lineage2.2 | 1 |
| lineage4.7 | 1 |
| lineage1.1.2 | 5 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1.2 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.1.1 | 3 |
| La3 | 1 |
| lineage5.2 | 1 |
| lineage1.1.3.2 | 1 |
| La1.8.1 | 1 |
| lineage4.8;lineage3 | 1 |
| La2 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 280 |
Geographic prevalence
Country level data for this variant is available for 69 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6358991 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR987722 | HR-TB | None | SRR10315635 | RR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315588 | HR-TB | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13423583 | Pre-XDR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR4815613 | Other | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR3675475 | Other | lineage4.1.1.3 | None | SRR19303805 | Other | lineage4.8 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815178 | Other | lineage4.8 | gb | ERR4815268 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR158583 | HR-TB | None | ERR4814524 | Other | lineage4.1.1 | gb | SAMN02585910 | Other | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814623 | Other | lineage4.8 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675234 | Other | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815502 | Other | lineage4.1 | None | ERR1750908 | Sensitive | lineage4 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814831 | Sensitive | lineage2.2.1 | gb | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815532 | Other | lineage3 | gb | ERR4815738 | Other | lineage3 | None | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675502 | Other | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816967 | RR-TB | lineage5 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4815994 | Other | lineage3 | gb | SRR3675550 | Other | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | SRR3675555 | HR-TB | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816232 | Other | lineage4 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR212121 | HR-TB | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816562 | Other | lineage4 | None | ERR4816477 | Other | lineage4.8 | None | SRR3675571 | HR-TB | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816627 | Other | lineage2.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817439 | Other | lineage4.6.2.2 | gb | ERR4817276 | Other | lineage2.2.1 | None | ERR4815804 | Other | lineage4.2.1 | gb | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4818671 | Other | lineage4.8 | gb | ERR4817665 | Other | lineage4.8 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4817847 | Other | lineage4.8 | gb | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818691 | Other | lineage4.8 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4819007 | Other | lineage2.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818753 | Other | lineage3 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR1035162 | Other | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR4818810 | Other | lineage2.2.1 | None | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR245758 | Other | lineage4.9.1 | None | ERR4818200 | Other | lineage3.1.2 | gb | ERR4819078 | Other | lineage4.3.3 | None | ERR2513298 | Other | lineage4.8 | gb | ERR2512656 | Sensitive | lineage4.1.2.1 | gb | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4819269 | Sensitive | lineage3 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR2513619 | Other | lineage4.8 | gb | ERR2513743 | Other | lineage4.1.2 | None | ERR4819192 | Other | lineage3 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR4819058 | HR-TB | lineage3 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4819166 | Other | lineage3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819287 | Other | lineage1.1.3.3 | None | SRR5341418 | Other | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820356 | Other | lineage1.1.3.1 | gb | ERR2513910 | Other | lineage3 | gb | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4819550 | Other | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514516 | Sensitive | lineage3 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820194 | Other | La3 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514711 | Sensitive | lineage2.2.1 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR2514896 | Other | lineage3 | gb | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR2514702 | Other | lineage4.1.2.1 | gb | ERR2514949 | Sensitive | lineage3 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820188 | Other | lineage3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821812 | Other | lineage4.8 | gb | SRR5341470 | HR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR2693231 | Other | None | ERR2706950 | MDR-TB | lineage5.2 | cd | ERR4821092 | Sensitive | lineage4.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR2693254 | Other | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821093 | Other | lineage4.3.3 | None | ERR2693230 | Other | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR2693257 | Other | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821171 | Sensitive | lineage4.3.1.1 | gb | ERR4821906 | Other | lineage4.1.1 | None | ERR4821200 | Other | lineage4.1.1 | gb | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821167 | Other | lineage4.8 | gb | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821371 | Other | lineage4.8 | gb | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4821610 | Other | lineage4.3.2 | None | ERR4822225 | Sensitive | lineage3 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821669 | Other | lineage3 | None | SRR6045555 | HR-TB | None | SRR6046208 | Other | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045235 | Other | La1.8.1 | gb | ERR4830529 | RR-TB | lineage2.2.1 | za | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046397 | Other | None | SRR6045399 | Other | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829289 | Other | lineage4.1.2.1 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR4829835 | HR-TB | lineage4.8 | it | SRR6257083 | HR-TB | lineage4.3.3 | None | SRR6046864 | Other | lineage3 | gb | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR502889 | Other | None | SRR7131026 | Other | lineage2.2.1 | None | ERR3797017 | Other | None | ERR323053 | HR-TB | None | ERR019855 | Other | lineage3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3797014 | Other | None | SRR8217901 | MDR-TB | lineage1.1.1.1 | None | ERR323039 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR387051 | HR-TB | None | ERR4798406 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None |
|---|
