Rv1630 - c.795C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
11 Sensitive
15 RR-TB
22 HR-TB
20 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| lineage3 | 3 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage4.9;lineage9 | 3 |
| lineage4.5 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.8 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1 | 4 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.1.2.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 95 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172310 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR13888750 | Other | La2 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR25827330 | MDR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR29097026 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR176740 | Other | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | SRR29096410 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4816478 | HR-TB | lineage4 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR7240033 | Other | La1.8.1 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR26936983 | MDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR28119843 | Sensitive | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
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