Rv0668 - c.2934C>T


Drug resistance types
14 Sensitive 4 RR-TB 31 HR-TB 14 MDR-TB 3 Pre-XDR-TB 3 XDR-TB 103 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 11
lineage4.9 26
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2.1;lineage3 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
15
lineage1.1.3.1 8
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage1.2.2.2 1
lineage5.2 2
lineage3 2
lineage4 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;lineage2.2.1 2
lineage4.4.1.1 1
lineage3.1 1
lineage2.2.1 11
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 8
lineage2.1 2
lineage4.3.4.2.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.9;lineage6.3 5
lineage2.1;lineage4.9;lineage6.3 7
lineage6.3.1 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
lineage2.2.1;lineage6.3 1
lineage4.1.1.1 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
La1.2 1
lineage4.6.2.2 1
La1.2.BCG;La1.8.1 1
lineage4.8 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1;lineage4.9 1
La3 1
La3;lineage4.8 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.2 2
lineage1.2.1.2 1
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
lineage1.2.1.2.1 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 172
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26159043 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
ERR13291601 Sensitive lineage1.1.3.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4819877 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR8217918 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3275694 RR-TB lineage1.1.3.1 nl
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1184346 HR-TB lineage3.1 None
SAMEA2535265 Sensitive lineage2.2.1 th
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR212001 HR-TB None
SRR28119752 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4818804 Sensitive lineage1.1.3.1 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
SRR3675248 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR19325553 Sensitive lineage1.1.3.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR7496472 Other lineage4.9 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR3675572 Other None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4816999 Other None
SRR21732179 Sensitive lineage1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
SRR23961542 Other La1;lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR21686100 Sensitive lineage1.1.3.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR553274 Sensitive lineage2.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2446523 RR-TB lineage1.1.3.1 nl
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR25827682 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6832787 Sensitive lineage2.2.1 None
ERR553275 Sensitive lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR13259967 MDR-TB lineage1.2.1.2.1 None
SRR3675275 Other lineage4.9 None
SRR18911906 Sensitive lineage1.1.3.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818552 Sensitive lineage1.1.3.1 gb