Rv0006 - c.465C>T
Drug resistance types
22 Sensitive
3 RR-TB
5 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 25 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28389816 | HR-TB | lineage4.1.2.1 | None | SRR30049957 | Other | lineage4.1.2.1 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR18897165 | Sensitive | lineage4.1.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR24035892 | Sensitive | lineage4.1.2.1 | None | SRR28859955 | Other | lineage4.1.2.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR18665469 | Sensitive | lineage4.1.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR29096673 | Sensitive | lineage4.1.2.1 | None | ERR11252736 | Other | lineage4.9 | None | SRR26112616 | Sensitive | lineage4.1.2.1 | None | SRR26112547 | Sensitive | lineage4.1.2.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR18665484 | MDR-TB | lineage4.1.2.1 | None | SRR30333247 | HR-TB | lineage4.1.2.1 | None | SRR16089625 | Sensitive | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR18665434 | Sensitive | lineage4.1.2.1 | None | SRR24035890 | Sensitive | lineage4.1.2.1 | None | SRR18665444 | MDR-TB | lineage4.1.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR24035844 | Sensitive | lineage4.1.2.1 | None | ERR4799537 | MDR-TB | lineage3 | None | ERR13110330 | Sensitive | lineage4.1.2.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR19241761 | Sensitive | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR27980504 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR28045006 | Sensitive | lineage3 | None | SRR24035891 | Sensitive | lineage4.1.2.1 | None | SRR27980489 | Sensitive | lineage4.1.2.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR28858677 | Sensitive | lineage4.1.2.1 | None | SRR28858617 | Sensitive | lineage4.1.2.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR26111927 | Sensitive | lineage4.1.2.1 | None | SRR28389875 | HR-TB | lineage4.1.2.1 | None |
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