Rv0006 - c.465C>T
Drug resistance types
28 Sensitive
3 RR-TB
5 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 4 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 30 |
| lineage2.2.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 2 |
| M.canetti;lineage4.2 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 55 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR29096544 | Sensitive | lineage4.1.2.1 | None |
| SRR6152809 | Sensitive | lineage4.1.2.1 | ca |
| SRR6832787 | Sensitive | lineage2.2.1 | None |
| ERR736875 | HR-TB | lineage4.9 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR29096673 | Sensitive | lineage4.1.2.1 | None |
| SRR26112616 | Sensitive | lineage4.1.2.1 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR24035891 | Sensitive | lineage4.1.2.1 | None |
| SRR16089625 | Sensitive | lineage4.1.2.1 | None |
| ERR13292140 | Sensitive | lineage4.1.2.1 | None |
| ERR13291324 | Sensitive | lineage4.1.2.1 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR28858617 | Sensitive | lineage4.1.2.1 | None |
| SRR18665469 | Sensitive | lineage4.1.2.1 | None |
| SRR1184024 | RR-TB | lineage2.2.1.1 | None |
| ERR13110330 | Sensitive | lineage4.1.2.1 | None |
| ERR4799537 | MDR-TB | lineage3 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR28389875 | HR-TB | lineage4.1.2.1 | None |
| SRR28389816 | HR-TB | lineage4.1.2.1 | None |
| SRR19241761 | Sensitive | lineage4.1.2.1 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR6045010 | Sensitive | lineage4.9 | None |
| ERR11252736 | Other | lineage4.9 | None |
| SRR26112547 | Sensitive | lineage4.1.2.1 | None |
| ERR736817 | HR-TB | lineage4.3.4 | None |
| SRR28045006 | Sensitive | lineage3 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR18665484 | MDR-TB | lineage4.1.2.1 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR30333247 | HR-TB | lineage4.1.2.1 | None |
| SRR18665434 | Sensitive | lineage4.1.2.1 | None |
| SRR27980489 | Sensitive | lineage4.1.2.1 | None |
| SRR28858677 | Sensitive | lineage4.1.2.1 | None |
| SRR24035892 | Sensitive | lineage4.1.2.1 | None |
| SRR30049957 | Sensitive | lineage4.1.2.1 | None |
| SRR24035890 | Sensitive | lineage4.1.2.1 | None |
| SRR28859955 | Other | lineage4.1.2.1 | None |
| SRR28859685 | Sensitive | lineage4.1.2.1 | None |
| SRR18665444 | MDR-TB | lineage4.1.2.1 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR24035844 | Sensitive | lineage4.1.2.1 | None |
| SRR26111927 | Sensitive | lineage4.1.2.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR27980504 | Sensitive | lineage4.1.2.1 | None |
| SRR18897165 | Sensitive | lineage4.1.2.1 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
