lineage | Count |
---|---|
19 | |
lineage4.9 | 15 |
lineage4.2.1.1 | 1 |
lineage2.2.1 | 4 |
lineage4.6.1 | 1 |
lineage3 | 2 |
lineage4.6.1.1 | 2 |
lineage4 | 3 |
lineage4.4.1.1.1 | 1 |
lineage4.3.2 | 2 |
lineage4.5;lineage2.2.1 | 1 |
lineage2.2 | 2 |
lineage4.9;lineage2.2.1 | 2 |
lineage2.2.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.6.3 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046824 | HR-TB | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | ERR502889 | Other | None | SRR7535053 | Sensitive | lineage3 | None | ERR4798406 | HR-TB | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | ERR3439432 | Other | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3468659 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4178291 | Sensitive | lineage4.3.2 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | ERR6865895 | Sensitive | lineage4.3.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR1791910 | Other | None | SRR19303931 | Other | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR192070 | Other | None | SRR3675456 | HR-TB | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | SRR6046482 | HR-TB | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR5341418 | Other | None | ERR2693227 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None |
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