Rv3596c - c.1696C>T


Drug resistance types
8 Sensitive 7 RR-TB 6 HR-TB 19 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 9 Other
lineage Counts
lineage Count
lineage4.9 11
La1.7;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.9;lineage7 3
lineage2.2.1 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.3 5
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 1
lineage2.1;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
spoligotype Counts
spoligotype Count
None 49
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675582 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SAMN02585944 Sensitive lineage4.3.3 za
ERR4796577 HR-TB None
SRR1180372 Sensitive lineage4.3.3 None
ERR176651 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR181887 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1184003 Sensitive lineage4.3.3 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR212125 HR-TB lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1180339 Sensitive lineage4.3.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
SRR1180939 Sensitive lineage4.3.3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None