Rv0668 - c.1287C>T


Drug resistance types
8 Sensitive 9 RR-TB 8 HR-TB 11 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 41 Other
lineage Counts
lineage Count
lineage4.4.1.1 2
lineage4.4.2 1
lineage4.9 13
lineage4.1.1.3 1
lineage2.2.2 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.3 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.3.1 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.6.2.2 1
lineage2.2 1
lineage4.3.2 1
M.canetti;lineage4.2 1
lineage4.8 3
lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage3.1.2.1 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.1.1 1
La1.6;La3;lineage4.9 2
lineage4.1.3 1
lineage4.4.1.1.1 1
lineage3.1.1 1
lineage3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.2.1 2
lineage3.1.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage1.2.1.2.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1.2 2
lineage3;lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.8.1 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 78
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4815301 Other lineage4.4.2 None
ERR2660539 Other lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4818126 Other lineage1.2.2 None
ERR4816852 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR21279370 HR-TB lineage2.2.2 None
ERR3283032 Other lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4819640 RR-TB lineage4.6.2.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4818407 Other lineage4.3.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4831529 Pre-XDR-TB lineage2.2.1 None
SRR6045217 Sensitive lineage4.9 None
ERR4819655 Other lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR4820324 Other lineage4 None
ERR4815777 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR3675446 RR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4821334 Other lineage4.1.3 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4820410 RR-TB lineage3.1.1 None
ERR4814748 Other lineage4.8 None
ERR4821679 Other lineage4.3.3 None
ERR4820833 Other lineage3;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819491 Other lineage4.1.2.1 None
SRR19303788 Sensitive lineage4.8 None
ERR4822222 Other lineage3.1.2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1183190 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4821214 Other lineage1.2.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4821981 Other lineage4.1.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
SRR1735596 RR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4821408 Sensitive lineage4.1.2 None
SRR6045548 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4188213 Other La1.8.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188222 Other La1.8.1 None