Rv0668 - c.1287C>T


Drug resistance types
5 Sensitive 10 RR-TB 13 HR-TB 17 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
lineage4.9 12
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage3;lineage4 1
lineage2.2.1 3
La1.6;La3;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 3
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.8.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.2 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.1 1
lineage4.4.1.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.4.1.1.1 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1.1.3 1
lineage4 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage3.1.2.2 1
lineage3.1.2.1 1
lineage3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1.1.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.3 2
M.canetti;lineage4.6.4;lineage4.9 1
lineage1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.3 1
lineage4.1.2.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3.1.1 1
lineage4.6.2.2 1
lineage4.4.2 1
lineage4.1.2 2
lineage1.2.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046385 Sensitive lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4816322 Other lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR1183190 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4819655 Other lineage4.8 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4815777 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR19303788 Sensitive lineage4.8 None
ERR4188213 Other La1.8.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4829039 RR-TB lineage4.3.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR4820324 Other lineage4 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4822222 Other lineage3.1.2.2 None
ERR4815022 Other lineage3.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820833 Other lineage3;lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR473279 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4818126 Other lineage1.2.2 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4821334 Other lineage4.1.3 None
ERR4821981 Other lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4820410 RR-TB lineage3.1.1 None
ERR4819640 RR-TB lineage4.6.2.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4815301 Other lineage4.4.2 None
ERR4814748 Other lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
ERR4831529 Pre-XDR-TB lineage2.2.1 None
ERR4821408 Sensitive lineage4.1.2 None
ERR4821679 Other lineage4.3.3 None
SRR21279370 HR-TB lineage2.2.2 None
ERR4821214 Other lineage1.2.1.2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4819491 Other lineage4.1.2.1 None
ERR4818407 Other lineage4.3.2 None
ERR4816852 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None