Rv0668 - c.3426C>T


Drug resistance types
9 Sensitive 5 RR-TB 4 HR-TB 9 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage2.2.1 5
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9 10
lineage3 1
4
lineage4.4.1.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.3 1
M.canetti;lineage4.9 2
lineage4.1.2.1.1 1
lineage2.1;lineage4.9 2
lineage4.8 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage3.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.1.1 1
lineage2.2.1;lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 54
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1181328 Other lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4407452 Other lineage3 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1172857 Other None
ERR12268496 Sensitive lineage4.4.1.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1173363 Other None
SRR6045795 Sensitive lineage2.2.1 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1173355 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1196566 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR4820112 Sensitive lineage4.1.1.1 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None