lineage | Count |
---|---|
28 | |
lineage4.3.3 | 3 |
lineage4.9 | 1 |
lineage4 | 5 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 7 |
lineage3.1 | 2 |
lineage4.8 | 2 |
lineage4.1.1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage3 | 1 |
lineage4.4.1.1 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1175049 | RR-TB | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR3675502 | Other | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR1204000 | Sensitive | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | ERR3275201 | Sensitive | lineage4.8 | nl | ERR158583 | HR-TB | None | ERR1035162 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675550 | Other | None | ERR2446570 | Sensitive | lineage4.8 | nl | ERR4820112 | Sensitive | lineage4.1.1 | None | SRR5341418 | Other | None | SRR6046824 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045233 | HR-TB | None | SRR6046397 | Other | None | ERR502943 | HR-TB | None | ERR4972483 | Pre-XDR-TB | lineage4.1.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR4407452 | Sensitive | lineage3 | None | ERR4811022 | HR-TB | None | ERR12268496 | Sensitive | lineage4.4.1.1 | None | ERR4798406 | HR-TB | None | ERR6198317 | Other | La1.2 | None |
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