lineage | Count |
---|---|
lineage2.1;lineage4.9 | 3 |
lineage4.5 | 24 |
La1.7;lineage4.2 | 1 |
1 | |
lineage2.2.1 | 2 |
lineage1.1.2 | 2 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
lineage4.8 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
lineage1.1.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
M.canetti;lineage4.2 | 1 |
lineage4.9 | 3 |
La3;lineage4.9 | 2 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage6.2.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
M.canetti;lineage4.6.4;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.2.1.1 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
M.canetti;lineage2.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR323043 | Other | lineage2.1;lineage4.9 | None |
SRR18500585 | Sensitive | lineage4.5 | None |
SRR23961559 | Other | La1.7;lineage4.2 | None |
SRR19612246 | Sensitive | lineage4.5 | None |
SRR15316446 | Other | lineage4.5 | None |
ERR234659 | Other | None | |
SRR6832787 | Sensitive | lineage2.2.1 | None |
SRR2101131 | Sensitive | lineage1.1.2 | None |
SRR21276955 | MDR-TB | lineage4.5 | None |
SRR17787481 | Sensitive | lineage4.5 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR23340115 | Sensitive | lineage4.8 | None |
ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
ERR4810798 | Sensitive | lineage4.5 | cn |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR4811508 | Sensitive | lineage4.5 | cn |
SRR30182826 | HR-TB | lineage1.1.1 | None |
SRR20969750 | Sensitive | lineage2.2.1;lineage4.5 | None |
SRR17787471 | Sensitive | lineage4.5 | None |
SRR6824366 | Pre-XDR-TB | lineage4.5 | cn |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR736867 | Other | lineage2.1;lineage4.9 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
ERR3283018 | HR-TB | lineage4.9 | None |
SRR17787499 | Other | lineage4.5 | None |
SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR17787478 | Sensitive | lineage4.5 | None |
SRR1167384 | Other | La3;lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
SRR1165628 | Other | La3;lineage4.9 | None |
SRR17787602 | Other | lineage4.5 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
SRR21657458 | Sensitive | lineage4.5 | None |
SRR29053164 | Sensitive | lineage4.5 | None |
ERR1023509 | Other | lineage4.9 | None |
ERR330693 | Sensitive | lineage1.1.2 | None |
SRR29539404 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29053187 | Sensitive | lineage4.5 | None |
ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
SRR21675707 | Sensitive | lineage4.5 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR6046225 | Other | lineage4.9;lineage6.3 | None |
SRR12420260 | Sensitive | lineage4.5 | None |
ERR10680108 | MDR-TB | lineage6.2.3 | None |
SRR15723132 | Sensitive | lineage4.5 | None |
SRR15723068 | Sensitive | lineage4.5 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR4811064 | Sensitive | lineage4.5 | cn |
SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
ERR3283042 | Other | lineage4.9 | None |
SRR15723014 | Sensitive | lineage4.5 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
SRR15723075 | Sensitive | lineage4.5 | None |
SRR6832178 | HR-TB | lineage4.2.1.1 | None |
ERR4811170 | Sensitive | lineage4.5 | cn |
ERR2179814 | Sensitive | lineage4.5 | cn |
SRR1184380 | Other | lineage2.1;lineage4.9 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |