Rv0005 - c.120C>T
Drug resistance types
24 Sensitive
1 RR-TB
7 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 24 |
| La3;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| 1 | |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.9 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage6.2.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.8 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 66 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15723075 | Sensitive | lineage4.5 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR4811508 | Sensitive | lineage4.5 | cn | ERR4811170 | Sensitive | lineage4.5 | cn | SRR17787471 | Sensitive | lineage4.5 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR29053164 | Sensitive | lineage4.5 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR29053187 | Sensitive | lineage4.5 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR18500585 | Sensitive | lineage4.5 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR234659 | Other | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2179814 | Sensitive | lineage4.5 | cn | SRR1167384 | Other | La3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4810798 | Sensitive | lineage4.5 | cn | SRR15723014 | Sensitive | lineage4.5 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR30182826 | HR-TB | lineage1.1.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR21657458 | Sensitive | lineage4.5 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1023509 | Other | lineage4.9 | None | ERR330693 | Sensitive | lineage1.1.2 | None | SRR29539404 | Pre-XDR-TB | lineage2.2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR21675707 | Sensitive | lineage4.5 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR12420260 | Sensitive | lineage4.5 | None | ERR10680108 | MDR-TB | lineage6.2.3 | None | SRR15723132 | Sensitive | lineage4.5 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR15316446 | Other | lineage4.5 | None | SRR17787499 | Other | lineage4.5 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR17787478 | Sensitive | lineage4.5 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR2101131 | Sensitive | lineage1.1.2 | None | ERR4811064 | Sensitive | lineage4.5 | cn | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR17787602 | Other | lineage4.5 | None | SRR20969750 | Sensitive | lineage2.2.1;lineage4.5 | None | SRR6824366 | Pre-XDR-TB | lineage4.5 | cn | SRR19612246 | Sensitive | lineage4.5 | None | SRR15723068 | Sensitive | lineage4.5 | None | SRR21276955 | MDR-TB | lineage4.5 | None | SRR17787481 | Sensitive | lineage4.5 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR23340115 | Sensitive | lineage4.8 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
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