Rv0407 - c.114C>T
Drug resistance types
4 Sensitive
2 RR-TB
70 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| 100 | |
| lineage4.8;La3 | 1 |
| lineage2.2.1 | 15 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4 | 7 |
| lineage2.2 | 4 |
| lineage4.9 | 10 |
| La1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage2 | 2 |
| lineage3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496472 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR1035162 | Other | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4818615 | Other | None | SRR5341302 | HR-TB | None | SRR5341418 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819932 | Other | lineage4.7 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341333 | HR-TB | None | ERR4820947 | Sensitive | lineage4 | None | ERR2693231 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6045526 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR3283024 | Other | None | SRR6832249 | Other | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR10796613 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789626 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3797014 | Other | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR4798406 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR5336148 | Other | None | ERR4407463 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR9117709 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172817 | HR-TB | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173118 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1173788 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1173778 | Other | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184372 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR15368973 | Other | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR176793 | Other | lineage4.1.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675502 | Other | None | SRR19304036 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675311 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR4816999 | Other | None | ERR4816180 | Sensitive | lineage3.1.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR4817037 | Other | lineage4.9 | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR4817060 | RR-TB | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None |
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