lineage | Count |
---|---|
lineage4.9 | 51 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 2 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage3.1.1 | 1 |
lineage2.1 | 1 |
lineage2.2.1 | 5 |
25 | |
lineage4.3.4 | 1 |
lineage4.1.1.3 | 1 |
lineage3.1.2.1 | 1 |
lineage4 | 12 |
lineage3 | 2 |
lineage4.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.6.1 | 1 |
lineage4.7 | 1 |
lineage4.8.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage6 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | SRR3675550 | Other | None | ERR4818536 | Other | lineage4.9 | None | ERR212123 | Other | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR1023509 | Other | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR4820112 | Sensitive | lineage4.1.1 | None | SRR5341315 | Sensitive | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR502889 | Other | None | SRR7496471 | Sensitive | None | SRR7535086 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR067681 | HR-TB | None | ERR323057 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283012 | Sensitive | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4796577 | MDR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4798406 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None |
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