EBG00000313339 - n.230T>A


Drug resistance types
26 Sensitive 9 RR-TB 17 HR-TB 21 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.9 43
La3;lineage4.9 6
lineage4.9;lineage9 2
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2.1.1 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.9 2
lineage2.2.1 13
M.canetti;lineage4.2 1
lineage1.1.3.1 1
1
lineage1.1.2 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.7.1 1
lineage4.9;lineage6.3 1
lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.6.2.2 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La2;lineage4.9 1
lineage4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.4.1.2 1
La1.7;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 98
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1202520 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR28119823 Sensitive lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045158 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1208653 Other lineage4.9 None
SRR1202388 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR1208327 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR987722 MDR-TB None
ERR245675 Sensitive lineage1.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR3675502 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR1202383 Sensitive lineage4.9 None
SRR1208886 Other lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
SRR1202397 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1208264 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR1202538 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181251 Other lineage2.2.1 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR1202451 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1815538 Other La1.7.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1202702 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR10808399 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR3283040 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1238558 Other lineage4.9 None
SRR1208539 Sensitive lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR6832249 Sensitive lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1202570 Sensitive lineage4.9 None
SRR1208774 Sensitive lineage4.9 None
SRR1208196 Sensitive lineage4.9 None
SRR1208211 Sensitive lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1208369 Other lineage4.9 None
SRR1208659 Other lineage4.9 None
SRR1208626 Sensitive lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1208556 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR779852 HR-TB lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1140724 Other lineage2.2.1 None
SRR1202728 Other lineage4.9 None
SRR1202706 Other lineage4.9 None
SRR1208575 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None