EBG00000313339 - n.230T>A
Drug resistance types
28 Sensitive
6 RR-TB
51 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 17 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage2.2.1 | 17 |
| 44 | |
| lineage3 | 4 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 19 |
| lineage2.2.1.1 | 5 |
| lineage4.2.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.2 | 2 |
| lineage4.8 | 1 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| La1.8.1 | 3 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 130 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4772225 | Other | La1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR9786774 | Sensitive | lineage4.3.4.2 | None | ERR987722 | HR-TB | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173310 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692825 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR8692882 | HR-TB | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR1815538 | Other | La1.7.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR176740 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675502 | Other | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675550 | Other | None | SRR3675571 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR5341418 | Other | None | ERR4818309 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR4818499 | Sensitive | lineage4.9 | None | ERR1023509 | Other | None | ERR2515746 | Sensitive | lineage2.2.1 | za | SRR5341470 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046362 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6045399 | Other | None | SRR6046397 | Other | None | ERR2843488 | Other | lineage2.2.2 | None | ERR4828361 | Other | lineage2.2.2 | vn | ERR502470 | RR-TB | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6896267 | Sensitive | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5087962 | Other | La1.8.1 | None | ERR323039 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1034634 | HR-TB | None | ERR3283014 | HR-TB | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3439449 | Other | La1.8.1 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None |
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