Rv0005 - c.138T>C


Drug resistance types
11 Sensitive 2 RR-TB 5 HR-TB 7 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
lineage4.9 17
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.9 3
lineage4.8 3
La1.7;lineage4.2 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 2
1
lineage2.2.1 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 52
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR926160 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6866096 Other lineage4.8 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502510 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR10808877 Other lineage4.8 None
ERR4819051 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR2184626 Other lineage4.8 pe
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR234659 Other None
SRR6832787 Sensitive lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None