lineage | Count |
---|---|
lineage1.1.3 | 97 |
lineage1.1.3;lineage2.2.1 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.2 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage1.1.3;lineage1.2.2.2 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
lineage2.2.1 | 1 |
M.canetti;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
spoligotype | Count |
---|---|
None | 114 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR21732051 | Sensitive | lineage1.1.3 | None |
SRR19318151 | HR-TB | lineage1.1.3 | None |
SRR27450338 | Sensitive | lineage1.1.3 | None |
SRR11662704 | MDR-TB | lineage1.1.3 | None |
ERR2517477 | Sensitive | lineage1.1.3 | nl |
ERR9125655 | Sensitive | lineage1.1.3 | None |
SRR25827494 | Sensitive | lineage1.1.3 | None |
SRR17856670 | Sensitive | lineage1.1.3 | None |
SRR21690349 | Sensitive | lineage1.1.3 | None |
ERR7902632 | Sensitive | lineage1.1.3 | None |
DRR474150 | Other | lineage1.1.3 | None |
ERR4797700 | Pre-XDR-TB | lineage1.1.3;lineage2.2.1 | in |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
SRR28044568 | Sensitive | lineage1.1.3 | None |
SRR11972442 | MDR-TB | lineage1.1.3 | None |
SRR1172709 | Sensitive | lineage1.1.3 | None |
SRR28868673 | Other | lineage1.1.3 | None |
ERR4828178 | HR-TB | lineage1.1.3 | vn |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
SRR29053566 | HR-TB | lineage1.1.3 | None |
SRR29050765 | HR-TB | lineage1.1.3 | None |
SRR10828628 | MDR-TB | lineage1.1.3 | None |
SRR29772497 | MDR-TB | lineage1.1.3 | None |
SRR11972439 | MDR-TB | lineage1.1.3 | None |
ERR13261313 | Sensitive | lineage1.1.3 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
SRR11972381 | Sensitive | lineage1.1.3 | None |
SRR28044572 | Sensitive | lineage1.1.3 | None |
SRR28045998 | Sensitive | lineage1.1.3 | None |
ERR775768 | Sensitive | lineage1.1.3 | th |
SRR28045644 | Sensitive | lineage1.1.3 | None |
ERR751961 | Sensitive | lineage1.1.3 | th |
ERR752124 | Sensitive | lineage1.1.3 | th |
ERR4820104 | Sensitive | lineage1.1.3 | None |
SRR28045056 | Sensitive | lineage1.1.3 | None |
SRR28045628 | Sensitive | lineage1.1.3 | None |
SRR28868526 | Sensitive | lineage1.1.3 | None |
SRR21732382 | HR-TB | lineage1.1.3 | None |
SRR28044851 | Sensitive | lineage1.1.3 | None |
SRR25340981 | Sensitive | lineage1.1.3 | None |
SRR11972448 | Sensitive | lineage1.1.3 | None |
SRR1172752 | Sensitive | lineage1.1.3 | None |
SRR25340887 | Sensitive | lineage1.1.3 | None |
ERR2514775 | Sensitive | lineage1.1.3 | None |
SRR30182554 | Sensitive | lineage1.1.3 | None |
ERR2512534 | Sensitive | lineage1.1.3 | gb |
ERR4799511 | Sensitive | lineage1.1.3 | in |
ERR2514427 | Sensitive | lineage1.1.3 | None |
SRR29772589 | MDR-TB | lineage1.1.3 | None |
SRR12882101 | HR-TB | lineage1.1.3 | None |
SAMN02599161 | Sensitive | lineage1.1.3 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
SRR21689496 | Sensitive | lineage1.1.3 | None |
SRR21733384 | Sensitive | lineage1.1.3 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR15014684 | Sensitive | lineage1.1.3 | None |
SRR29772424 | MDR-TB | lineage1.1.3 | None |
ERR752184 | Sensitive | lineage1.1.3;lineage1.2.2.2 | th |
SRR16058378 | Sensitive | lineage1.1.3 | None |
ERR752134 | Sensitive | lineage1.1.3 | th |
ERR752291 | Sensitive | lineage1.1.3 | th |
ERR718494 | Sensitive | lineage1.1.3 | th |
ERR718404 | Sensitive | lineage1.1.3 | th |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR11662423 | MDR-TB | lineage1.1.3 | None |
SRR6832787 | Sensitive | lineage2.2.1 | None |
SRR1172914 | Sensitive | lineage1.1.3 | None |
SRR15014611 | MDR-TB | lineage1.1.3 | None |
SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
SRR29772761 | MDR-TB | lineage1.1.3 | None |
ERR9901059 | Sensitive | lineage1.1.3 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR22251817 | Sensitive | lineage1.1.3 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
SRR7898223 | MDR-TB | lineage1.1.3 | in |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR22251785 | Sensitive | lineage1.1.3 | None |
SRR28044579 | Sensitive | lineage1.1.3 | None |
SRR1173036 | Sensitive | lineage1.1.3 | None |
SRR6045556 | Sensitive | lineage1.1.3 | gb |
SRR30182383 | Other | lineage1.1.3 | None |
ERR4796606 | Sensitive | lineage1.1.3 | in |
SRR29231207 | HR-TB | lineage1.1.3 | None |
SAMN02599157 | Sensitive | lineage1.1.3 | in |
ERR4816246 | Sensitive | lineage1.1.3 | gb |
SRR5709782 | MDR-TB | lineage1.1.3 | th |
ERR4796582 | Sensitive | lineage1.1.3 | in |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR29772517 | MDR-TB | lineage1.1.3 | None |
ERR2513092 | Sensitive | lineage1.1.3 | None |
SRR26159059 | Sensitive | lineage1.1.3 | None |
ERR3275469 | Sensitive | lineage1.1.3 | nl |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR13289718 | Sensitive | lineage1.1.3 | None |
ERR752163 | Sensitive | lineage1.1.3 | th |
ERR752094 | Sensitive | lineage1.1.3 | th |
ERR752158 | Sensitive | lineage1.1.3 | th |
ERR768024 | Sensitive | lineage1.1.3 | th |
ERR718265 | Sensitive | lineage1.1.3 | th |
ERR751986 | Sensitive | lineage1.1.3 | th |
SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR718458 | Sensitive | lineage1.1.3 | th |
SRR26159058 | Sensitive | lineage1.1.3 | None |
SRR28046092 | Sensitive | lineage1.1.3 | None |
SRR28044548 | Sensitive | lineage1.1.3 | None |
ERR718550 | Sensitive | lineage1.1.3 | th |
ERR4799750 | Sensitive | lineage1.1.3 | in |
ERR4799954 | Sensitive | lineage1.1.3 | in |
ERR2446094 | Sensitive | lineage1.1.3 | nl |
ERR4798474 | Sensitive | lineage1.1.3 | in |
SRR8380877 | Sensitive | lineage1.1.3 | in |
ERR11067264 | Sensitive | lineage1.1.3 | None |
ERR11067247 | Sensitive | lineage1.1.3 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |