lineage | Count |
---|---|
lineage4 | 44 |
17 | |
lineage4.8 | 1 |
lineage4;lineage2 | 1 |
lineage4.9 | 43 |
lineage2.2.1.2 | 1 |
lineage3 | 1 |
lineage4.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage2.2.1 | 6 |
lineage4.1.2.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1.1 | 2 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814639 | HR-TB | lineage4 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | SRR3675550 | Other | None | SRR3675387 | Sensitive | None | ERR4816151 | Other | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR1035162 | Other | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341418 | Other | None | ERR2514267 | MDR-TB | lineage2.2.1.2 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820112 | Sensitive | lineage4.1.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046482 | HR-TB | None | ERR1063855 | Other | lineage4 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR502943 | HR-TB | None | ERR067681 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR349299 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR3439432 | Other | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4798406 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4798431 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1204000 | Sensitive | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None |
---|