lineage | Count |
---|---|
lineage4.9 | 18 |
lineage4 | 4 |
11 | |
lineage4.1.2.1 | 2 |
lineage4.3.3 | 2 |
lineage3 | 3 |
lineage4.8 | 1 |
lineage2.2.1 | 3 |
La1 | 1 |
lineage1.2.2.2 | 1 |
lineage6 | 1 |
lineage4.7 | 1 |
lineage4.4.1.1.1 | 1 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814976 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675550 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR1035162 | Other | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341418 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR6046824 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR502889 | Other | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR3439432 | Other | None | ERR017781 | Other | lineage3 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4798406 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9787336 | Other | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None |
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