Rv0682 - c.105C>T
Drug resistance types
31 Sensitive
5 RR-TB
8 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 33 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 9 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2.1.1 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 4 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR3675270 | Other | lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
| ERR3283028 | Other | La3;lineage4 | None |
| SRR1180375 | Sensitive | lineage4.9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR9971150 | RR-TB | lineage4.8.1 | None |
| SRR1175487 | Sensitive | lineage4.9 | None |
| SRR1181283 | Sensitive | lineage4.9 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR1180977 | Sensitive | lineage4.9 | None |
| SRR6044835 | Other | lineage4.9 | None |
| SRR9971080 | RR-TB | lineage2.2.1 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR3283057 | Sensitive | La3;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR6359082 | Other | lineage4.9 | None |
| SRR1181402 | Sensitive | lineage4.9 | None |
| SRR1180312 | Sensitive | lineage4.9 | None |
| SRR1180406 | Sensitive | lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR1180444 | Sensitive | lineage4.9 | None |
| SRR6046210 | Other | lineage4.9 | None |
| SRR6046046 | Other | lineage4.9 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR6832178 | HR-TB | lineage4.2.1.1 | None |
| SRR1184021 | Sensitive | lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR3283014 | Sensitive | La3;lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR1183054 | Sensitive | lineage4.9 | None |
| SRR1181349 | Sensitive | lineage4 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR4769452 | Other | lineage4.9 | None |
| SRR1180413 | Sensitive | lineage4.9 | None |
| SRR1181351 | Sensitive | lineage4.9 | None |
| SRR1183145 | Other | lineage2.2.1 | None |
| ERR3797081 | Sensitive | lineage4.9 | None |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| SRR3675510 | Sensitive | La3;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR1180410 | Sensitive | lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR2514327 | HR-TB | lineage4.8 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| SRR1180300 | Sensitive | lineage4.9 | None |
| SRR1180391 | Sensitive | lineage4.9 | None |
| SRR1180946 | Sensitive | lineage2;lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR6045053 | Other | lineage4 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| ERR4799025 | Other | lineage4.8 | None |
| ERR9786444 | Sensitive | lineage4.8 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| SRR10315751 | MDR-TB | lineage4.8 | None |
| SRR6046593 | Other | lineage4.9 | None |
| ERR3797063 | Sensitive | La3;lineage4.9 | None |
| ERR3283047 | Sensitive | La3;lineage4.9 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| ERR2660539 | Other | lineage4.9 | None |
| ERR1034634 | HR-TB | lineage4.9 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR1180355 | Sensitive | lineage4.9 | None |
| SRR6832787 | Sensitive | lineage2.2.1 | None |
| SRR6046878 | Other | lineage4.9 | None |
| SRR1181325 | Sensitive | lineage4.9 | None |
