Rv0668 - c.1461C>G
Drug resistance types
8 Sensitive
14 RR-TB
67 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| 63 | |
| lineage4.9 | 28 |
| lineage4.1.2.1 | 14 |
| La1.8.1 | 3 |
| lineage4 | 1 |
| lineage2.2.1 | 16 |
| lineage3 | 7 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2 | 1 |
| lineage4.8 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage1 | 1 |
| lineage4.3 | 1 |
| lineage1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798406 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6359045 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR21732954 | Sensitive | lineage4.9 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13837684 | Sensitive | lineage4.9 | None | SRR13861168 | RR-TB | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861296 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | ERR1035239 | HR-TB | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1640750 | HR-TB | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675502 | Other | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675234 | Other | None | ERR181744 | HR-TB | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816466 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | ERR4817069 | RR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR1035162 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR3275941 | RR-TB | lineage4.3 | nl | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3275220 | Other | lineage3 | nl | ERR2509673 | Other | lineage2.2.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341418 | Other | None | ERR2693231 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR2693232 | Other | lineage4.9 | None | ERR2446144 | Other | lineage3 | nl | SRR6044890 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | SRR7535086 | Other | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR133986 | HR-TB | None |
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