EBG00000313339 - n.2923G>A
Drug resistance types
5 Sensitive
16 RR-TB
6 HR-TB
31 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 2 |
| 1 | |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage3 | 7 |
| M.canetti;lineage4.2;lineage4.9 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage2.2.1 | 11 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 11 |
| lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La2;lineage4.9 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.2 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1.4 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.2.1.1 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.1.2.1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.2.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La1.7 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage3.1.2.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 99 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11465360 | MDR-TB | lineage4.3.4.1 | None | ERR987722 | MDR-TB | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6832787 | Other | lineage2.2.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3275190 | Other | lineage3 | nl | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR7069922 | Other | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR3675222 | Other | La1.7 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR3675502 | Sensitive | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4820193 | Other | lineage3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR12199400 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR7851312 | Other | La1.2 | None |
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