lineage | Count |
---|---|
lineage2.2.1 | 7 |
77 | |
lineage2.2 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage2 | 3 |
lineage4.9;La3 | 1 |
lineage4.1.2.1 | 2 |
lineage4.1.1 | 1 |
lineage2.1 | 1 |
lineage4.3 | 1 |
lineage1.1.2 | 3 |
lineage4 | 8 |
lineage4.2.2.2 | 1 |
lineage4.8 | 1 |
lineage4.9 | 7 |
lineage2.2.1.1 | 1 |
La1.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
La3 | 1 |
lineage3.1 | 1 |
lineage4.3.3 | 1 |
lineage4.3.4.1 | 1 |
lineage4.2.1 | 1 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 124 |
ID | Drug resistance | Lineage | Country iso2 | SRR18003019 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR19304036 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176643 | HR-TB | None | SRR3675502 | Other | None | SRR3675234 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR158583 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675510 | Other | None | ERR176751 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR4816009 | Other | lineage1.1.2 | None | ERR2027263 | Other | lineage4 | None | ERR212121 | HR-TB | None | SRR5341418 | Other | None | SRR3742665 | HR-TB | None | ERR1035162 | Other | None | SRR3675571 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR2693230 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341302 | HR-TB | None | ERR1023509 | Other | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR133825 | Sensitive | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323039 | HR-TB | None | ERR067681 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR133986 | HR-TB | None | ERR3797017 | Other | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR4810741 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3797061 | Other | None | ERR4407463 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736874 | HR-TB | None | ERR702404 | HR-TB | None | ERR6358991 | HR-TB | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR1172817 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837766 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12142341 | HR-TB | None |
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